New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 547749644 (0.900)4 (0.080) 4/240 NT 8.9% coding (345/594 nt) PP_4814 ATP‑dependent protease La domain‑containing protein
?NC_002947 = 5477510 40 (0.850)coding (331/594 nt) PP_4814 ATP‑dependent protease La domain‑containing protein

ATGAACGGCAACAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATCCTGCTGCACGAAGTCGCGGATCACCGCT  >  NC_002947/5477350‑5477643
                                                                                                                                                  |                                                                                                                                                    
aTGAACGGCAACAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCg                                                                                                                                                   >  2:872947/1‑150 (MQ=255)
 tGAACGGCAACAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCNCNANCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGAGCTGTCgg                                                                                                                                                  <  1:709925/150‑1 (MQ=255)
 tGAACGGCAACAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCgg                                                                                                                                                  >  1:26700/1‑150 (MQ=255)
      ggCAACAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGc                                                                                                                                            <  1:6123/150‑1 (MQ=255)
       gttgctggTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCt                                                                                                                                           >  2:1081118/7‑150 (MQ=255)
         aaCAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCt                                                                                                                                              >  1:1167309/1‑145 (MQ=255)
         aaCAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCt                                                                                                                                              <  2:1167309/145‑1 (MQ=255)
         aaCAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTcc                                                                                                                                         >  1:1234668/1‑150 (MQ=255)
           cAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCgg                                                                                                                                       >  2:1151632/1‑150 (MQ=255)
             ggTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGca                                                                                                                                     >  2:547652‑M2/1‑148 (MQ=255)
              gTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGcag                                                                                                                                    <  1:735845‑M2/150‑4 (MQ=255)
                   ccAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCAtt                                                                                                                               >  1:1230049/1‑150 (MQ=255)
                         gATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCgg                                                                                                                                       <  2:77217/136‑1 (MQ=255)
                         gATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCgg                                                                                                                                       >  1:77217/1‑136 (MQ=255)
                         gATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCt                                                                                                                         >  2:176098/1‑150 (MQ=255)
                               ccAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTACGGCAGCCATTGCACCTGGCcca                                                                                                                   <  1:693073/150‑1 (MQ=255)
                                 aGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCccacc                                                                                                                 >  2:793203/1‑150 (MQ=255)
                                 aGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCccacc                                                                                                                 >  1:918408/1‑150 (MQ=255)
                                       tGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAAc                                                                                                           <  1:1081118/150‑1 (MQ=255)
                                           gCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGt                                                                                                       <  1:1151632/150‑1 (MQ=255)
                                            cccGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTc                                                                                                      <  2:126810/150‑1 (MQ=255)
                                             ccGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTcc                                                                                                     >  1:179077/1‑150 (MQ=255)
                                             ccGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTcc                                                                                                     <  2:763053/150‑1 (MQ=255)
                                                  cACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTg                                                                                                <  1:176098/150‑1 (MQ=255)
                                                  cACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGCCGGAGCAGGCCGAcagcccgttgctggaggccgat                                                                                                                 >  1:562199‑M2/1‑111 (MQ=255)
                                                  cACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGCCGGAGCAGGCCGAcagcccgttgctggaggccgat                                                                                                                 <  2:562199‑M2/133‑23 (MQ=255)
                                                    ccGGCAGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCa                                                                                              <  2:527123/150‑1 (MQ=255)
                                                         cgcgGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCg                                                                                         <  2:26700/150‑1 (MQ=255)
                                                           cgGCATTCCCAGGGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGa                                                                                       <  2:556478/150‑1 (MQ=255)
                                                           cgGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGTAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGa                                                                                       <  1:872947/150‑1 (MQ=255)
                                                             gCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGc                                                                                     >  2:52388/1‑150 (MQ=255)
                                                                     aGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCATCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGa                                                                             <  2:1003176/150‑1 (MQ=255)
                                                                       cgcTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGAtt                                                                           <  1:52388/150‑1 (MQ=255)
                                                                                cATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGcgccg                                                                  <  2:1234668/150‑1 (MQ=255)
                                                                                   ggggTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTCCTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCAc                                                               >  2:611798/1‑150 (MQ=255)
                                                                                       ggCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGccc                                                           <  1:1113732/149‑1 (MQ=255)
                                                                                               cAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGAcgcg                                                   <  2:200040/150‑1 (MQ=255)
                                                                                               cAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGAcgcg                                                   >  1:1087969/1‑150 (MQ=255)
                                                                                                aGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCgg                                                  >  2:751413/1‑150 (MQ=255)
                                                                                                       ccaGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCa                                           >  1:704130/1‑150 (MQ=255)
                                                                                                          gcagcGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCCCCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAg                                                                       <  1:886913/119‑1 (MQ=255)
                                                                                                          gcagcGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAg                                                                       >  2:886913/1‑119 (MQ=255)
                                                                                                          gcagcGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCa                                        <  2:918408/150‑1 (MQ=255)
                                                                                                                 cAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGtt                                 <  2:549180/150‑1 (MQ=255)
                                                                                                                       gtcgtcATCGGCCTCCAGCAACGGGCTGccggagcaggccgacag                                                                                                                                     >  2:1222531‑M1/1‑28 (MQ=255)
                                                                                                                       gtcgtcATCGGCCTCCAGCAACGGGCTGccggagcaggccgacag                                                                                                                                     <  1:1222531‑M1/45‑18 (MQ=255)
                                                                                                                         cgtcATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATCctgct                         >  1:355767/1‑150 (MQ=255)
                                                                                                                             aTCGGCCTCCAGCAACGGGCTGtcggcctgctccggcagcccgttgctggaggccgatgacgacctattggcgctgctggtggccctgggtgagcaccccatggtcgaagcgctgggcatgccgcggccggtg                                       <  2:562199‑M1/133‑112 (MQ=255)
                                                                                                                             aTCGGCCTCCAGCAACGGGCTGtcggcctgctccggcagcccgttgctggaggccgatgacgacctattggcgctgctggtggccctgggtgagcaccccatggtcgaagcgctgggcatgccgcggccggtg                                       >  1:562199‑M1/1‑22 (MQ=255)
                                                                                                                             aTCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATCCTGCTGCAc                     >  2:883630/1‑150 (MQ=255)
                                                                                                                                     ccAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATCCTGCTGCACGAAGTcgc             <  1:751413/150‑1 (MQ=255)
                                                                                                                                     ccAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATCCTGCTGCACGAAGTcgc             <  2:1230049/150‑1 (MQ=255)
                                                                                                                                      cAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATcc                             <  1:777978/133‑1 (MQ=255)
                                                                                                                                      cAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATcc                             >  2:777978/1‑133 (MQ=255)
                                                                                                                                      cAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATCCTGCTGCACGAAGTcgcg            >  2:589699/1‑150 (MQ=255)
                                                                                                                                                cTGccggagcaggccgacagcccgttgctggaggccgatgacgacctattggcgctgctggtggccctgggtgagcaccccatggtcgaagcgctgggcatgccgcggccggtggacgggcgtcaggcgctggccaatcagctggcgtac   <  1:735845‑M1/150‑148 (MQ=255)
                                                                                                                                                cTGTCGGCCTGCTCCGGcagcccgttgctggaggccgatgacgac                                                                                                           <  1:1222531‑M2/45‑29 (MQ=255)
                                                                                                                                                cTGTCGGCCTGCTCCGGcagcccgttgctggaggccgatgacgac                                                                                                           >  2:1222531‑M2/1‑17 (MQ=255)
                                                                                                                                                 tGccggagcaggccgacagcccgttgctggaggccgatgacgacctattggcgctgctggtggccctgggtgagcaccccatggtcgaagcgctgggcatgccgcggccggtggacgggcgtcaggcgctggccaatcagctggcgtacc  >  2:547652‑M1/1‑2 (MQ=255)
                                                                                                                                                 tGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGcgccgc                                                                 >  2:770440/1‑86 (MQ=255)
                                                                                                                                                 tGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGcgccgc                                                                 <  1:770440/86‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
ATGAACGGCAACAGGTACGCCAGCTGATTGGCCAGCGCCTGACGCCCGTCCACCGGCCGCGGCATGCCCAGCGCTTCGACCATGGGGTGCTCACCCAGGGCCACCAGCAGCGCCAATAGGTCGTCATCGGCCTCCAGCAACGGGCTGTCGGCCTGCTCCGGCAGCCATTGCACCTGGCCCACCAGCAACTGGTCCTTCTGCACCTCGGAGCTTTCCAGATTGAAGCGCCGCACGCCCTCGACGCGGATACCCAGCAAGCCGTTATCCTGCTGCACGAAGTCGCGGATCACCGCT  >  NC_002947/5477350‑5477643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.