| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2646146 = | 31 (0.630) | 4 (0.090) | 4/234 | NT | 11.6% | coding (1211/2499 nt) | PP_2316 | ABC transporter permease |
| ? | NC_002947 | 2646184 = | 32 (0.700) | coding (1173/2499 nt) | PP_2316 | ABC transporter permease | |||||
AACCGAGCAACAGCAGGCCGCCGAGCAGAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGCACCAC > NC_002947/2646036‑2646330 | aaCCGAGCAACAGCAGGCCGCCGAGCAGAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAg < 2:991298/150‑1 (MQ=255) cGAGCAACAGCAGGCCGCCGAGCAGAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTa > 1:608510/1‑150 (MQ=255) gAGCAACAGCAGGCAGCAGAGCAGAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTAt > 2:1078677/1‑150 (MQ=255) gtaccgggctggtggcactggctggctttgccctgccgccgattgcagcgctgggccaggtgccgccactgcgcgtgctgcgccgtgacctgctgccgatacctGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAg < 2:224101‑M1/40‑1 (MQ=255) gtaccgggctggtggcactggctggctttgccctgccgccgattgcagcgctgggccaggtgccgccactgcgcgtgctgcgccgtgacctgctgccgatacctGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAg > 1:224101‑M1/105‑144 (MQ=255) cagcagGCCGCCGAGCAGAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGgcag > 1:832455/1‑150 (MQ=255) cagGCCGCCGAGCAGAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGcagcag < 2:1233450/150‑1 (MQ=255) ggCCGCCGAGCAGAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGt > 1:500750/1‑150 (MQ=255) gAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCgcagca > 1:778647/1‑150 (MQ=255) aaGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCAc < 1:1078677/150‑1 (MQ=255) gTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTACGGCGCCACATGATCAGATATTGTTCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCAcgc > 1:797085/1‑150 (MQ=255) tGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGCGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTTACGGCGCAGCAcgcg > 2:76307/1‑150 (MQ=255) aCCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTggc < 1:1091259/150‑1 (MQ=255) ccAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTggcg < 1:1078873/150‑1 (MQ=255) cACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAgg < 2:1258489/116‑1 (MQ=255) cACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAgg > 1:1258489/1‑116 (MQ=255) aGGGCGAAGGTGAGCAGCAGATGGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCt < 2:988744/150‑1 (MQ=255) aGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCt < 1:1267955/150‑1 (MQ=255) gccactgcgcgtgctgcgccgtgacctgctgccgatacctGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCa > 1:251559‑M1/41‑79 (MQ=255) gccactgcgcgtgctgcgccgtgacctgctgccgatacctGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCa < 2:251559‑M1/39‑1 (MQ=255) aTCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCaaa < 2:778647/150‑1 (MQ=255) aGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAagcca < 1:653886/150‑1 (MQ=255) ggCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAg < 2:128639/139‑1 (MQ=255) ggCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAg > 1:128639/1‑139 (MQ=255) gCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAagccagc < 2:500750/150‑1 (MQ=255) gcgcCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGc > 2:1065421/1‑150 (MQ=255) gcCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGcca > 1:619530/1‑150 (MQ=255) acaTGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTggc < 1:789231/95‑1 (MQ=255) acaTGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTggc > 2:789231/1‑95 (MQ=255) ccAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGa > 2:83535/1‑150 (MQ=255) ctgcgagcagttggctggtgtacggcgccgccctgctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTAc < 2:224101‑M2/104‑1 (MQ=255) ctgcgagcagttggctggtgtacggcgccgccctgctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTAc > 1:224101‑M2/41‑144 (MQ=255) tgcgagcagttggctggtgtacggcgccgccctgctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTggc < 2:251559‑M2/40‑1 (MQ=255) tgcgagcagttggctggtgtacggcgccgccctgctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTggc > 1:251559‑M2/40‑79 (MQ=255) ggcggcGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGcc > 1:102139/1‑121 (MQ=255) ggcggcGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGcc < 2:102139/121‑1 (MQ=255) gcgcCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGa > 1:39504/1‑150 (MQ=255) cgcCTTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGaa < 1:94848/150‑1 (MQ=255) cacCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATgcc < 2:940957/150‑1 (MQ=255) acCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATgccg > 2:363134/1‑150 (MQ=255) cAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATgccgcc > 1:739646/1‑150 (MQ=255) cAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATgccgcc > 2:780311/1‑150 (MQ=255) ccAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGc > 1:1118291/1‑150 (MQ=255) ccAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACAGATACCTGCCAGCGCAGGAACGATGCCGCCAGc > 1:361219/1‑150 (MQ=255) ctgctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCTCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGc > 2:366203‑M2/9‑150 (MQ=255) tgctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGca > 2:100911‑M2/8‑150 (MQ=255) ctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGcacc > 2:1103350‑M2/6‑150 (MQ=255) cgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGcaccac < 2:28156‑M2/147‑1 (MQ=255) gcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGt > 1:123326‑M2/3‑39 (MQ=255) gcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGt < 2:123326‑M2/37‑1 (MQ=255) gcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGTCACCTGGCCCAGCGCTGCAATCGGCGGCa < 1:520423‑M2/71‑1 (MQ=255) gcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGTCACCTGGCCCAGCGCTGCAATCGGCGGCa > 2:520423‑M2/3‑73 (MQ=255) | AACCGAGCAACAGCAGGCCGCCGAGCAGAAGTGCAGCGACCAGGCCGCCACCGAGCAGGGCGAAGGTGAGCAGCAGATCGAGGCTCAGGCGCCACATGATCAGGCCCAGGGCGAGCAGGGCGGCGCCGTACACCAGCCAACTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGCACCAC > NC_002947/2646036‑2646330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |