New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4091366 =	44 (0.900)	6 (0.130)	6/240	NT	12.1%	intergenic (+8/‑70)	gudP/garD	glucarate transporter/galactarate dehydratase
	?	NC_002947	4091395 =	45 (0.960)					intergenic (+37/‑41)	gudP/garD	glucarate transporter/galactarate dehydratase

AGCTATCTGGTTATCGTCGGCCCCATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAACGACGGCGGCTTGGGCGAAGGCGCCCGCT  >  NC_002947/4091248‑4091541                                                                                                                                                     |                                                                                                                                                    ttgacgacgaccacgacgttggcgtcgtcgggcaggcggacgtagcggggcgagtcggaatgttagacacactgcatgtttgggccctacttgtcaggttctcaggcttttgtacatcCGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGAt                                                                                                                                                   >  1:1043802‑M1/119‑150 (MQ=255) aGCTATCTGGTTATCGTCGGCCCCATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGAt                                                                                                                                                   >  1:524816/1‑150 (MQ=255)     aTCTGGTTATCGTCGGCCCCATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTAc                                                                                                                                               <  1:1155080/150‑1 (MQ=255)         ggTTATCGTCGGCCCCATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACaaaa                                                                                                                                           >  1:787347/1‑150 (MQ=255)          gaccacgacgttgtcgtcgtcgtgcaggcggacgtagcggggcgagtcggaatgttcgatcaactgcatgtttgcgacctacttgtcaggttctcaggcttttgtacatccgcccgcgccgggtcgcccggcatgggcgGATGTACaaaa                                                                                                                                           <  1:1120130‑M2/11‑1 (MQ=255)           ttATCGTCGGCCCCATCAAGCGTATCGTATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGc                                                                                                                                         >  1:1266227/1‑150 (MQ=255)            tATCGTCGGCCCCATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCCGCTCCCGTCACTGAAAAAACACGCCCCCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGcc                                                                                                                                        >  1:7766/1‑150 (MQ=255)            tATCGTCGGCCCCATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGcc                                                                                                                                        <  1:14600/150‑1 (MQ=255)              tcgtcgGCCCCACCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTg                                                                                                                                      <  1:1024248/150‑1 (MQ=255)                    gCCCCATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAAcc                                                                                                                                >  1:1087406/1‑150 (MQ=255)                       ccATCAAGCGTATCGAATTGCGTGATGCTGCCCCGCCGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGa                                                                                                                             <  1:1093432/150‑1 (MQ=255)                       ccATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGa                                                                                                                             <  1:600156/150‑1 (MQ=255)                           cAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAg                                                                                                                         <  2:524816/150‑1 (MQ=255)                                gTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAgcg                                                                                                                    <  1:935203/150‑3 (MQ=255)                                        ttGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGcc                                                                                                                                        <  2:867410/122‑1 (MQ=255)                                        ttGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGcc                                                                                                                                        >  1:867410/1‑122 (MQ=255)                                              gATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGt                                                                                                      <  2:508548/150‑1 (MQ=255)                                                   tgcCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATc                                                                                                 >  1:117316/1‑150 (MQ=255)                                                      cccGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑aa                                                                                             <  1:127992/150‑1 (MQ=255)                                                          ggaatgttcgatcaactgcatgtttgggccctacttgtcaggttctcaggcttttgtacatccgcccgcgccgggtcgcccggcatgggcgGATGTACAAAAGCCTGAGAACCt                                                                                                                               <  2:658163‑M2/23‑1 (MQ=255)                                                          ggaatgttcgatcaactgcatgtttgggccctacttgtcaggttctcaggcttttgtacatccgcccgcgccgggtcgcccggcatgggcgGATGTACAAAAGCCTGAGAACCt                                                                                                                               >  1:658163‑M2/92‑114 (MQ=255)                                                            gCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCATGAGAACCTGACAAGTAGGGCCCAAACAt                                                                                                           >  1:306086/1‑131 (MQ=255)                                                            gCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCATGAGAACCTGACAAGTAGGGCCCAAACAt                                                                                                           <  2:306086/131‑1 (MQ=255)                                                             ccACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCg                                                                                      >  2:659552/1‑150 (MQ=255)                                                               acacGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTcc                                                                                       >  1:392126/1‑147 (MQ=255)                                                               acacGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTcc                                                                                       <  2:392126/147‑1 (MQ=255)                                                                 acGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AAc                                                                                            <  1:366867/140‑1 (MQ=255)                                                                 acGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AAc                                                                                            >  2:366867/1‑140 (MQ=255)                                                                      gAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGAc                                                                                                                            >  1:619172/1‑104 (MQ=255)                                                                      gAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGAc                                                                                                                            <  2:619172/104‑1 (MQ=255)                                                                        gCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGc                                                                           <  2:1133275/150‑1 (MQ=255)                                                                                             ggCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCacgacgac                                                      <  2:960820/150‑1 (MQ=255)                                                                                              gCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCac                                                            <  1:650893/143‑1 (MQ=255)                                                                                              gCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCac                                                            >  2:650893/1‑143 (MQ=255)                                                                                               ccAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCAcgacgacga                                                    >  2:1124016/1‑150 (MQ=255)                                                                                                aggttctcaggcttttgtacatcCGCCCATGCCGGG‑CGACCCGGCGCGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTcc                                                                                       <  2:658163‑M1/91‑1 (MQ=255)                                                                                                aggttctcaggcttttgtacatcCGCCCATGCCGGG‑CGACCCGGCGCGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTcc                                                                                       >  1:658163‑M1/24‑114 (MQ=255)                                                                                                      ccGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAAcgtc                                             <  2:1087406/150‑1 (MQ=255)                                                                                                       cGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGa                                                                                     >  1:59557/1‑109 (MQ=255)                                                                                                       cGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGa                                                                                     <  2:59557/109‑1 (MQ=255)                                                                                                       cGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAAcgtcg                                            >  2:676551/1‑150 (MQ=255)                                                                                                            ttttgtacatcCGCCCATGCCGGG‑CGACCCGGCGCGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGTCGCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGgtc                                       <  1:1120130‑M1/139‑1 (MQ=255)                                                                                                            cTGAAAAAACACGCCCGCGTCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGgtc                                       <  2:1169499/150‑1 (MQ=255)                                                                                                            cTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGt                                                                                                      >  2:327309/1‑88 (MQ=255)                                                                                                            cTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGt                                                                                                      <  1:327309/88‑1 (MQ=255)                                                                                                                     atccgcccatgccgggcgacccggcgcgggcgGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTGTGTCT‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCCCGACGACGCCAACGTCGTGGTCGTCGTCaa                               >  1:1043802‑M2/33‑150 (MQ=255)                                                                                                                      acGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAacg                             >  1:682220/1‑150 (MQ=255)                                                                                                                         gcccatgccgggcgacccggcgcgggcgGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGGCAacgac                           >  1:638041‑M2/29‑150 (MQ=255)                                                                                                                         CCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGaa                                                                                                                                  >  2:257071‑M1/1‑47 (MQ=255)                                                                                                                         CCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGaa                                                                                                                                  <  1:257071‑M1/47‑1 (MQ=255)                                                                                                                           ccatgccgggcgacccggcgcgggcgGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAACGAcgg                         >  1:783893‑M2/27‑150 (MQ=255)                                                                                                                                 gggTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACACGTAGGGCCCAAACATGCAGTTCCTTGTCTCATTTCCAGT‑GTCCCTGTTCATCCTCTCAGACGACCTCGAGATCGTCGTGTTCGTCGTCAACGACGGCGGCTTg                  <  2:787347/150‑1 (MQ=255)                                                                                                                                        cccGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGgt                                        <  1:894977/122‑1 (MQ=255)                                                                                                                                        cccGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGgt                                        >  2:894977/1‑122 (MQ=255)                                                                                                                                        cccGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAACGACGGCGGCTTGGGCGaa            <  2:117316/150‑1 (MQ=255)                                                                                                                                         ccGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAACGACGGCGGCTTGGGCGAAg           >  2:975765/1‑150 (MQ=255)                                                                                                                                         ccGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAACGACGGCGGCTTGGGCGAAg           >  2:424826/1‑150 (MQ=255)                                                                                                                                          cGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAACGACGGCGGCTTGGGCGAAgg          >  1:652765/1‑150 (MQ=255)                                                                                                                                            gCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACCACGTCGTGGTCGTCGTCAACGACGGCGGCTTGGGCGACGgcg        >  1:585399/1‑150 (MQ=255)                                                                                                                                                  gcgGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCacgacgac                                                      <  2:832130‑M2/95‑1 (MQ=255)                                                                                                                                                  gcgGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAACGACGGCGGCTTGGGCGAAGGCGCCCGCt  >  2:831093‑M2/4‑150 (MQ=255)                                                                                                                                                  gcgGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGAATCGCCCCGCTACGTCCGCCTGCacgacgac                                                      >  1:832130‑M2/4‑98 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AGCTATCTGGTTATCGTCGGCCCCATCAAGCGTATCGAATTGCGTGATGCTGCCCCGAAGCCACACGCTGAGCCTGCCACCGACGGCGAACTGGCCAGCTCCCGTCACTGAAAAAACACGCCCGCGCCGGGTCG‑CCCGGCATGGGCGGATGTACAAAAGCCTGAGAACCTGACAAGTAGGGCCCAAACATGCAGTTGATCG‑AACATTCCGACTCGCCCCGCTACGTCCGCCTGCACGACGACGACAACGTCGTGGTCGTCGTCAACGACGGCGGCTTGGGCGAAGGCGCCCGCT  >  NC_002947/4091248‑4091541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.