| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1367887 = | 81 (0.710) | 7 (0.060) | 6/230 | NT | 8.7% | coding (313/603 nt) | PP_1193 | membrane protein |
| ? | NC_002947 | 1367919 = | 70 (0.650) | coding (345/603 nt) | PP_1193 | membrane protein | |||||
CATCGCCAGGCTTACCGCCGACATGATTACCATGATCATCCCCGGGTTCCCCACCCACGTGATTGCCATGATCGTCACCCGCTTCAGCATGGTTGCTGCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1368042‑1367887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccacGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAACCCGGGGATGATCATGGTAATCATGTCGGCGGTAAGCCTGGCGATGATCACGGCAATCATGTTGGTGGTG > NC_002947/1367919‑1368066 CATCGCCAGGCTTACCGCCGACATGATTACCATGATCATCCCCGGGTTCCCCACCCACGTGATTGCCATGATCGTCACCCGCTTCAGCATGGTTGCTGCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCAT < 1:2998239/150‑1 ATCGCCAGGCTTACCGCCGACATGATTACCATGATCATAACCGTGTTCCCCACCCACGTGATTGCCATGATCGTCACCCGCTTCAGCATGGTTGCTGCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATG < 1:2336517/150‑1 TCGCCAGGCTTACCGCCGACATGATTACCATGATCATCCCCGGGTTCCCCACCCACGTGATTGCCATGATCGTCACCCGCTTCAGCATGGTTGCTGCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGG > 1:366753/1‑150 CAGGCTTACCGCCGACATGATTACCATGATCATCCCCGGGTTCCCCACCCACGTGATTACCATGATCGTCACCCGCTTCAGCATGGTTGCTGCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGGCCAC > 2:222402/1‑150 ATGATCGTCACCCGCTTCAGCATGGTTGCTGCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGGCC < 1:61595/87‑1 ATGATCGTCACCCGCTTCAGCATGGTTGCTGCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGGCC > 2:61595/1‑87 GCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGGCCAC < 2:1606582/59‑1 GCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGGCCAC > 1:1606582/1‑59 ATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGAGTGGGGAACCCGTGGAGGATCATGTGAATCATGTCGGCG > 2:160177/1‑150 GCCACTGCCGCTGTTGCCGGCATGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAACCCGGGGATGATCATGG < 2:2037085/124‑1 GCCACTGCCGCTGTTGCCGGCATGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAACCCGGGGATGATCATGG > 1:2037085/1‑124 CCACTGCCGCTGTTGCCGGCATGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGG < 1:207346/102‑1 CCACTGCCGCTGTTGCCGGCATGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGG > 2:207346/1‑102 CCACTGCCGCTGTTGCCGGCATGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATC < 1:1182772/92‑1 CCACTGCCGCTGTTGCCGGCATGGCCACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATC > 2:1182772/1‑92 ACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAACCCGGGGATGATCATGGTAATCATGTCGGCGGTAAGCCTGGCGATGATCACGGCAATCATGTTGGTGGTG > 1:2182546/1‑150 ACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAACCCGGGGATGATCATGGTAAT > 1:2791790/1‑101 ACGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAACCCGGGGATGATCATGGTAAT < 2:2791790/101‑1 CATCGCCAGGCTTACCGCCGACATGATTACCATGATCATCCCCGGGTTCCCCACCCACGTGATTGCCATGATCGTCACCCGCTTCAGCATGGTTGCTGCTGCGCCCAGCGTTTGAATTACCGTCGTGGCCACTGCCGCTGTTGCCGGCATGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1368042‑1367887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccacGACGGTAATTCAAACGCTGGGCGCAGCAGCAACCATGCTGAAGCGGGTGACGATCATGGCAATCACGTGGGTGGGGAACCCGGGGATGATCATGGTAATCATGTCGGCGGTAAGCCTGGCGATGATCACGGCAATCATGTTGGTGGTG > NC_002947/1367919‑1368066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |