| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2280773 | 97 (0.850) | 6 (0.050) | 5/236 | NT | 5.8% | coding (1870/2082 nt) | fadH | 2,4‑dienoyl‑CoA reductase |
| ? | NC_002947 | = 2280792 | 100 (0.900) | coding (1889/2082 nt) | fadH | 2,4‑dienoyl‑CoA reductase | |||||
TCCGGCGCGGCAGGTGTACCTGTTGCAGCGCAAGAAATCCAAGGTGGGCGACGGGCTCGGCAAGACGACCGGCTGGATTCACCGCACCGGGTTGAAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2280622‑2280773‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgTCCACACGAATGTGCAGGCCGGCATCGTCGATACCCAGATACTCGACACTGTTGAGCATCTGCACCCCCTTGTTCTTCAACCCGGTGCGGTGAATCCAGCCGGTCGTCTTGCCGAGCCCGTCGCCCACCTTGGATTTCTTGCGCTG < NC_002947/2280792‑2280647 TCCGGCGCGGCAGGTGTACCTGTTGCAGCGCAAGAAATCCAAGGTGGGCGACGGGCTCGGCAAGACGACCGGCTGGATTCACCGCACCGGGTTGAAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGC > 2:1553390/1‑150 CGGCGCGGCAGGTGTACCTGTTGCAGCGCAAGAAATCCAAGGTGGGCGACGGGCTCGGCAAGACGACCGGCTGGATTCACCGCACCGGGTTGAAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGCCG > 1:1960326/1‑150 CGGCGCGGCAGGTGTACCTGTTGCAGCGCAAGAAATCCAAGGTGGGCGACGGGCTCGGCAAGACGACCGGCTGGATTCACCGCACCGGGTTGAAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGCCG < 1:622834/150‑1 GGGCTCGGCAAGACGACCGGCTGGATTCACCGCACCGGGTTGAAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGGCTCGCC‑‑‑GCCGTCCACACGAATGTGCAGGCCGGCATCGTCGATACCCAGATACTC < 1:2378713/141‑1 GGGCTCGGCAAGACGACCGGCTGGATTCACCGCACCGGGTTGAAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGGCTCGCC‑‑‑GCCGTCCACACGAATGTGCAGGCCGGCATCGTCGATACCCAGATACTC > 2:2378713/1‑141 AAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGCCGTCCACACGAATGTGCAGGCCGGCATCGTCGA < 1:1916368/89‑1 AAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGCCGTCCACACGAATGTGCAGGCCGGCATCGTCGA > 2:1916368/1‑89 AACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGCCGTCCACACGAATGTGCAGGCCGGCATCGTCGA < 1:1161538/86‑1 AACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGCCGTCCACACGAATGTGCAGGCCGGCATCGTCGA > 2:1161538/1‑86 GCCGTCCACACGAATGTGCAGGCCGGCATCGTCGATACCCAGATACTCGACACTGTTGAGCATCTGCACCCCCTTGTTCTTCAACCCGGTGCGGTGAATCCAGCCGGTCGTCTTGCCGAGCCCGTCGCCCACCTTGGATTTCTTGCGCTG < 2:1100849/150‑1 TCCGGCGCGGCAGGTGTACCTGTTGCAGCGCAAGAAATCCAAGGTGGGCGACGGGCTCGGCAAGACGACCGGCTGGATTCACCGCACCGGGTTGAAGAACAAGGGGGTGCAGATGCTCAACAGTGTCGAGTATCTGGGTATCGACGATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2280622‑2280773‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgTCCACACGAATGTGCAGGCCGGCATCGTCGATACCCAGATACTCGACACTGTTGAGCATCTGCACCCCCTTGTTCTTCAACCCGGTGCGGTGAATCCAGCCGGTCGTCTTGCCGAGCCCGTCGCCCACCTTGGATTTCTTGCGCTG < NC_002947/2280792‑2280647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |