| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2356702 = | 97 (0.850) | 8 (0.080) | 7/218 | NT | 8.5% | coding (163/711 nt) | PP_2070 | AraC family transcriptional regulator |
| ? | NC_002947 | 2356737 = | 85 (0.830) | coding (128/711 nt) | PP_2070 | AraC family transcriptional regulator | |||||
GCAAGCACTGGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2356862‑2356702‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcccgccggggATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTCGTTATTG > NC_002947/2356737‑2356884 GCAAGCACTGGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGAT > 1:1458130/1‑150GCAAGCACTGGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGAT < 1:2224992/150‑1 CAAGCACTGGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATG < 2:607423/150‑1 AAGCACTGGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGC > 2:17547/1‑150 CACTGGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCG > 2:3053153/1‑150 TGGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCG < 2:217873/150‑1 GGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGG < 2:799900/150‑1 GGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGG < 1:3044234/150‑1 GAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGATGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGG > 1:504468/1‑150 AGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCC > 1:202611/1‑140 AGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCC < 2:202611/140‑1 GACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGG > 2:303450/1‑144 GACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGG < 1:303450/144‑1 GACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGCTGA‑CCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACC < 1:1407162/150‑1 GGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGG < 1:821665/133‑1 GGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGG > 2:821665/1‑133 GGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGG > 1:486014/1‑131 GGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGG < 2:486014/131‑1 CTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGG < 2:2315560/93‑1 CTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGG > 1:2315560/1‑93 CCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGG > 2:1932575/1‑79 CCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGG < 1:1932575/79‑1 TGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGG‑TCAGCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTG < 2:2564252/104‑1 TGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGG‑TCAGCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTG > 1:2564252/1‑104 TGGGTGATCCCCAGAGGGCATGC‑GTGGTGGATGCCCGCCGGGG‑TCAGCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCGGTAG > 2:2285301/1‑150 CGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGG > 1:2300463/1‑78 CGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGG < 2:2300463/78‑1 GGGCATGC‑CTTGTGGATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGC > 2:1025228/1‑50 GGGCATGC‑CTTGTGGATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGC < 1:1025228/50‑1 GTGGATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTC < 2:1678469/133‑1 GTGGATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTC > 1:1678469/1‑133 ATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCAT > 1:1626122/1‑150 CCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTC > 1:289300/1‑150 CCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTC > 2:1143205/1‑150 CCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGT > 1:638129/1‑109 CCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGT < 2:638129/109‑1 CCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCCAACAACACCGCTGGCGGCGTAAATCAGCTGTGCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTC > 1:837373/1‑150 CGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTCG < 1:2166013/150‑1 CGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTCG < 1:1143205/150‑1 GGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTCGTTATT < 1:630648/150‑1 GGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCCGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTCGTTATTG > 2:2987281/1‑150 GCAAGCACTGGAAAGGGACTACGGACACGGCGATGAAGTGGCCAGCCACTGCCACGCCGAAGACCAGCTGATTTACGCCGCCAGCGGCGTGATGCGGGTCAGCAGCGAGGGCGGCAGCTGGGTGATCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2356862‑2356702‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcccgccggggATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCCTTTCCAGTGCTTGCATGCAGGCCATCCTCGTTATTG > NC_002947/2356737‑2356884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |