New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2356702 =97 (0.850)8 (0.080) 7/218 NT 8.5% coding (163/711 nt) PP_2070 AraC family transcriptional regulator
?NC_002947 2356737 = 85 (0.830)coding (128/711 nt) PP_2070 AraC family transcriptional regulator

Only 100 of 132 total aligned reads displayed.

GCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCC  >  NC_002947/2356553‑2356848
                                                                                                                                                     |                                                                                                                                                   
gcCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGTCAGCGTTCGATCTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGAc                                                                                                                                                     >  2:889243/1‑150 (MQ=255)
gcCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGAc                                                                                                                                                     <  1:1141330/150‑1 (MQ=255)
 ccGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGAcc                                                                                                                                                    <  2:2377268/150‑1 (MQ=255)
    tCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCcg                                                                                                                                                 <  2:2199111/150‑1 (MQ=255)
      gcgcAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCcggc                                                                                                                                               <  1:2879711/150‑1 (MQ=255)
       cgaggatggcctgcatgcaagcactggaaagggactacggacacggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCcggcg                                                                                                                                              <  1:1143205‑M1/8‑1 (MQ=255)
       cgaggatggcctgcatgcaagcactggaaagggactacggacacggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCcggcg                                                                                                                                              <  1:2166013‑M1/8‑1 (MQ=255)
        gaggatggcctgcatgcaagcactggaaagggactacggacacggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCcggcgg                                                                                                                                             >  1:289300‑M1/142‑150 (MQ=255)
        gaggatggcctgcatgcaagcactggaaagggactacggacacggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCcggcgg                                                                                                                                             >  2:1143205‑M1/142‑150 (MQ=255)
            atggcctgcatgcaagcactggaaagggactacggacacggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCCGGCGGGCAt                                                                                                                                         >  1:1626122‑M1/138‑150 (MQ=255)
                aGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCcac                                                                                                                                     >  1:16655/1‑150 (MQ=255)
                 gCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCAt                                                                                                                                         >  2:2944302/1‑145 (MQ=255)
                 gCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCAt                                                                                                                                         <  1:2944302/145‑1 (MQ=255)
                       gTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCAt                                                                                                                             <  1:1510839/150‑1 (MQ=255)
                         gACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGc                                                                                                                           <  2:2398488/150‑1 (MQ=255)
                                 gaaagggactacggacacggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCCGGCGGGCATCcac                                                                                                                                     <  2:1678469‑M1/17‑1 (MQ=255)
                                 gaaagggactacggacacggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCCGGCGGGCATCcac                                                                                                                                     >  1:1678469‑M1/117‑133 (MQ=255)
                                         gTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGTCCCCGTCGGTCATCCACAAG‑GCATGCCCGCCGGGGAACaaac                                                                                                           >  2:646222/1‑147 (MQ=255)
                                            cgcgCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGc                                                                                                        >  1:800629/1‑150 (MQ=255)
                                               gcagcaGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTgc                                                                                                     >  1:1775674/1‑150 (MQ=255)
                                                 acggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCcggcgg                                                                                                                                             <  2:638129‑M1/9‑1 (MQ=255)
                                                 acggcgatgaagtggccagccactgccacgccgaagaccagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCcggcgg                                                                                                                                             >  1:638129‑M1/101‑109 (MQ=255)
                                                           acacGACGATGACCTGGCAGCGTTCGATGGGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCgctgc                                                                                         <  2:2609598/150‑1 (MQ=255)
                                                            cacGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCgctgct                                                                                        >  2:893025/1‑150 (MQ=255)
                                                               gacgaTGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑Gc                                                                                                                               <  1:2955436/108‑1 (MQ=255)
                                                               gacgaTGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑Gc                                                                                                                               >  2:2955436/1‑108 (MQ=255)
                                                               gacgaTGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCa                                                                                                              >  2:1634025/1‑125 (MQ=255)
                                                               gacgaTGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGAc                                                                                     >  1:2575953/1‑150 (MQ=255)
                                                                 cgaTGACCTGGCAGCGTTCGATGTGGGCATCGCGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGAccc                                                                                   <  1:1213574/150‑1 (MQ=255)
                                                                   aTGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGAc                                                                                                                                                     >  1:598598/1‑83 (MQ=255)
                                                                        cTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCcggcgg                                                                                                                                             >  1:543945/1‑86 (MQ=255)
                                                                        cTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCcggcgg                                                                                                                                             <  2:543945/86‑1 (MQ=255)
                                                                        cTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTCAGGACGCAGACTCTGACTTCCATGGGGATGGCATGGCTGACCCCGGCGGGCAGCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCAc                                                                            >  1:2364774/1‑150 (MQ=255)
                                                                             aGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCAcgccgc                                                                       >  1:17547/1‑150 (MQ=255)
                                                                               cGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGc                                                                                                                           >  2:1631790/1‑96 (MQ=255)
                                                                               cGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGc                                                                                                                           <  1:1631790/96‑1 (MQ=255)
                                                                                     aTGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGgcggcg                                                               >  1:2285389/1‑150 (MQ=255)
                                                                                        cagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctggctgaCCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCa                                                                                                          >  1:2564252‑M1/62‑104 (MQ=255)
                                                                                        cagctgatttacgccgccagcggcgtgatgcgggtcagcagcgagggcggcagctggctgaCCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCa                                                                                                          <  2:2564252‑M1/43‑1 (MQ=255)
                                                                                         gggCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCgg                                                                                                                    >  1:176854/1‑93 (MQ=255)
                                                                                         gggCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCgg                                                                                                                    <  2:176854/93‑1 (MQ=255)
                                                                                          ggCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAAt                                                          >  2:630648/1‑150 (MQ=255)
                                                                                           gCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATc                                                         <  2:800629/150‑1 (MQ=255)
                                                                                               cGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCt                                                     <  1:2267289/150‑1 (MQ=255)
                                                                                                gAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTg                                                    >  1:2111546/1‑150 (MQ=255)
                                                                                                 agcagcAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTgg                                                   <  1:893025/150‑1 (MQ=255)
                                                                                                  gcagcaAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGt                                                  <  1:95149/150‑1 (MQ=255)
                                                                                                   cagcaAGGGGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTc                                                 <  1:1930773/150‑1 (MQ=255)
                                                                                                      caAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTc                                              >  1:2941026/1‑150 (MQ=255)
                                                                                                       ccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCCGGCGGGCATCCACAAG‑GCATGCccgccg                                                                                                                     <  2:2300463‑M1/32‑1 (MQ=255)
                                                                                                       ccagcggcgtgatgcgggtcagcagcgagggcggcagctgggtgatCCCCGGCGGGCATCCACAAG‑GCATGCccgccg                                                                                                                     >  1:2300463‑M1/47‑78 (MQ=255)
                                                                                                             cgcATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTgg                                       <  1:1854209/150‑1 (MQ=255)
                                                                                                              gcATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGc                                      >  2:889939/1‑150 (MQ=255)
                                                                                                                aTGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTg                                                    >  2:802489/1‑134 (MQ=255)
                                                                                                                aTGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTg                                                    <  1:802489/134‑1 (MQ=255)
                                                                                                                aTGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAg                                    >  2:2699431/1‑150 (MQ=255)
                                                                                                                 tGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTc                                              >  1:355480/1‑139 (MQ=255)
                                                                                                                 tGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTc                                              <  2:355480/139‑1 (MQ=255)
                                                                                                                      cccACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCGTGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCGGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGtggctg                              <  1:2927277/149‑1 (MQ=255)
                                                                                                                      aCCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGtggctg                              <  1:2783411/150‑1 (MQ=255)
                                                                                                                      aCCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGtggctg                              <  1:1634823/150‑1 (MQ=255)
                                                                                                                       ccACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGtggctgg                             >  2:114802/1‑150 (MQ=255)
                                                                                                                        cACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCgc                                                                                            >  2:129386/1‑86 (MQ=255)
                                                                                                                        cACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCgc                                                                                            <  1:129386/86‑1 (MQ=255)
                                                                                                                        cACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCAt                                                                               >  2:1718364/1‑99 (MQ=255)
                                                                                                                        cACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGc                                                      <  2:1632543/124‑1 (MQ=255)
                                                                                                                        cACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGc                                                      >  1:1632543/1‑124 (MQ=255)
                                                                                                                           gCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCAc                         >  1:552149/1‑150 (MQ=255)
                                                                                                                           gCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCAc                         >  2:2156586/1‑150 (MQ=255)
                                                                                                                           gCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGAATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCAc                         <  1:646222/150‑1 (MQ=255)
                                                                                                                              tttCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGGGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTc                      <  1:889243/150‑1 (MQ=255)
                                                                                                                               ttCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCa                     <  1:2561087/150‑1 (MQ=255)
                                                                                                                               gcgagggcggcagctgggtgatCCCCGGCGGGCATCCACAAG‑GCATGccc                                                                                                                         <  1:1025228‑M1/28‑1 (MQ=255)
                                                                                                                                 cATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATc                   <  2:2285389/150‑1 (MQ=255)
                                                                                                                                  aTGCGGATGGCATGGCTGACACCGGCGGACATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCg                  >  1:643004/1‑150 (MQ=255)
                                                                                                                                   tGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCAcgcc                                                                         >  1:2197376/1‑94 (MQ=255)
                                                                                                                                    gCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGcc                <  1:2692898/150‑1 (MQ=255)
                                                                                                                                      ggATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCt                                                     <  1:1311682/111‑1 (MQ=255)
                                                                                                                                      ggATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCt                                                     >  2:1311682/1‑111 (MQ=255)
                                                                                                                                      ggATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCgt              <  2:2941026/150‑1 (MQ=255)
                                                                                                                                       gATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCgtg             >  2:77095/1‑150 (MQ=255)
                                                                                                                                        atggcatggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCgtgt            <  1:77095/150‑1 (MQ=255)
                                                                                                                                        atggcatggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCgtgt            >  2:2834133/1‑150 (MQ=255)
                                                                                                                                        atggcatggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCgtgc            <  2:2111546/150‑2 (MQ=255)
                                                                                                                                          ggcatggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTcc          <  2:1240834/150‑1 (MQ=255)
                                                                                                                                            catggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCgc                                                                                            >  2:2069318/1‑66 (MQ=255)
                                                                                                                                             atggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTa       >  1:2884893/1‑150 (MQ=255)
                                                                                                                                             atggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGACAGTGGCTGGCCACTTCATCGCCGTGTCCGTa       <  2:2657147/150‑1 (MQ=255)
                                                                                                                                              tggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAg      >  1:1450431/1‑150 (MQ=255)
                                                                                                                                               ggtgatCCCCGGCGGGCATGC‑CTTGTGGATGCCCGCCGGGG‑TCAGCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTc    <  1:1407162‑M1/144‑1 (MQ=255)
                                                                                                                                               ggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTggcggc                                                                >  1:1924225/1‑91 (MQ=255)
                                                                                                                                               ggcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCCGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGt     <  2:2211663/150‑1 (MQ=255)
                                                                                                                                                gcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCg                                                                                  >  1:1040833/1‑72 (MQ=255)
                                                                                                                                                gcTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCg                                                                                  <  2:1040833/72‑1 (MQ=255)
                                                                                                                                                 cTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGtggctg                              <  1:386418/123‑1 (MQ=255)
                                                                                                                                                 cTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGtggctg                              >  2:386418/1‑123 (MQ=255)
                                                                                                                                                  tGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGt                                         <  1:2747965/111‑1 (MQ=255)
                                                                                                                                                  tGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGt                                         >  2:2747965/1‑111 (MQ=255)
                                                                                                                                                  tGACCCCGGCGGGCATCAACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATAGCCGTGTCCGTAGTccc  >  2:2284350/1‑150 (MQ=255)
                                                                                                                                                     CCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGcc                <  1:821665‑M1/133‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
GCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGACCCCGGCGGGCATCCACAAG‑GCATGCCCGCCGGGGATCACCCAGCTGCCGCCCTCGCTGCTGACCCGCATCACGCCGCTGGCGGCGTAAATCAGCTGGTCTTCGGCGTGGCAGTGGCTGGCCACTTCATCGCCGTGTCCGTAGTCCC  >  NC_002947/2356553‑2356848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.