| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2567688 = | 88 (0.770) | 6 (0.050) | 6/234 | NT | 6.7% | coding (283/879 nt) | PP_2250 | LysR family transcriptional regulator |
| ? | NC_002947 | 2567703 = | 82 (0.750) | coding (268/879 nt) | PP_2250 | LysR family transcriptional regulator | |||||
AACTTGGCTACAGCCTGTTCGAACGTGGCCCGCGTGAAGTTCGCCCAACCGCACAGGCCTTGGCCCTGGAGCCACACGCCAGGCTGATTGCCGAACAACTGGGGCTGCTGCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2567840‑2567688‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGTAGCCAAGTTCTGCTTCAAG > NC_002947/2567703‑2567850 AACTTGGCTACAGCCTGTTCGAACGTGGCCCGCGTGAAGTTCGCCCAACCGCACAGGCCTTGGCCCTGGAGCCACACGCCAGGCTGATTGCCGAACAACTGGGGCTGCTGCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCA < 2:869030/150‑1AACTTGGCTACAGCCTGTTCGAACGTGGCCCGCGTGAAGTTCGCCCAACCGCACAGGCCTTGGCCCTGGAGCCACACGCCAGGCTGATTGCCGAACAACTGGGGCTGCTGCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCA < 2:2242459/150‑1AACTTGGCTACAGCCTGTTCGAACGTGGCCCGCGTGAAGTTCGCCCAACCGCACAGGCCTTGGCCCTGGAGCCACACGCCAGGCTGATTGCCGAACAACTGGGGCTGCTGCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCA > 1:869030/1‑150 CTTGGCTACAGCCTGTTCGAACGTGGCCCGCGTGAAGTTCGCCCAACCGCACAGGCCTTGGCCCTGGAGCCACACGCCAGGCTGATTGCCGAACAACTGGGGCTGCTGCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCAGC < 1:906235/150‑1 CACACGCCAGGCTGATTGCCGAACAACTGGGGCTGCTGCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCAGC < 1:1374784/80‑1 CACACGCCAGGCTGATTGCCGAACAACTGGGGCTGCTGCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCAGC > 2:1374784/1‑80 GAACAACTGGGGCTGCTCCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCA < 1:590070/58‑1 GAACAACTGGGGCTGCTCCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCA > 2:590070/1‑58 TCCCAAGGGCTGGAGAGCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCC > 1:2425476/1‑79 TCCCAAGGGCTGGAGAGCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCC < 2:2425476/79‑1 CCAAGGGCTGGAGAGCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGT < 1:2949533/149‑1 CCAAGGGCTGGAGAGCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGT > 2:2949533/1‑149 CAAGGGCTGGAGAGCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTC > 2:1610835/1‑65 CAAGGGCTGGAGAGCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTC < 1:1610835/65‑1 CAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGTAGCCAAGTTCTGCTTC > 1:2958571/1‑150 CAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGG < 2:1899715/72‑1 CAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGG > 1:1899715/1‑72 CCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGTAGCCAAGTTCTGCTTCAAG > 1:2799740/1‑150 AACTTGGCTACAGCCTGTTCGAACGTGGCCCGCGTGAAGTTCGCCCAACCGCACAGGCCTTGGCCCTGGAGCCACACGCCAGGCTGATTGCCGAACAACTGGGGCTGCTGCAGGTTCATGCTCTGGAGCTGTCCCAAGGGCTGGAGAGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2567840‑2567688‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGTAGCCAAGTTCTGCTTCAAG > NC_002947/2567703‑2567850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |