New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2567688 =88 (0.770)6 (0.050) 6/234 NT 6.7% coding (283/879 nt) PP_2250 LysR family transcriptional regulator
?NC_002947 2567703 = 82 (0.750)coding (268/879 nt) PP_2250 LysR family transcriptional regulator

Only 100 of 109 total aligned reads displayed.

GTCGGCACGGCCGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGTA  >  NC_002947/2567539‑2567832
                                                                                                                                                     |                                                                                                                                                 
gTCGGCACGGCCGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAg                                                                                                                                                   >  1:1037080/1‑150 (MQ=255)
 tCGGCACGGCCGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCATGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAgg                                                                                                                                                  <  2:545330/150‑1 (MQ=255)
 tCGGCACGGCCGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTTTCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAgg                                                                                                                                                  >  1:2340834/1‑150 (MQ=255)
 cttgaagcagaacttggctacagcctgttcgaacgtggcccgcgtgaagttcgcccaaccgcacaggccttggccctggagccacacgccaggctgattgccgaacaactggggctgctgcaggttcatgctctggagctgtcccaaggg                                                                                                                                                  >  1:2799740‑M1/149‑150 (MQ=255)
  cGGCACGGCCGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGgc                                                                                                                                                 <  2:1059485/150‑1 (MQ=255)
    gaagcagaacttggctacagcctgttcgaacgtggcccgcgtgaagttcgcccaaccgcacaggccttggccctggagccacacgccaggctgattgccgaacaactggggctgctgcaggttcatgctctggagctgtcccaagGgctg                                                                                                                                               >  1:2958571‑M1/146‑150 (MQ=255)
    gCACGGCCGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGgctg                                                                                                                                               <  2:1595298/150‑1 (MQ=255)
      aCGGCCGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGgctgct                                                                                                                                             <  2:2137153/150‑1 (MQ=255)
           cGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCa                                                                                                                                        >  2:2331547/1‑150 (MQ=255)
                tCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCt                                                                                                                                   <  1:1748862/150‑1 (MQ=255)
                 ccAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCtt                                                                                                                                  >  2:701610/1‑150 (MQ=255)
                  cAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTg                                                                                                                                 <  1:469391/150‑1 (MQ=255)
                   aGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTgg                                                                                                                                <  2:1037080/150‑1 (MQ=255)
                   aGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTgg                                                                                                                                >  1:2480478/1‑150 (MQ=255)
                   aGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGAAGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTgg                                                                                                                                <  2:2229743/150‑1 (MQ=255)
                    acagcctgttcgaacgtggcccgcgtgaagttcgcccaaccgcacaggccttggccctggagccacacgccaggctgattgccgaacaactggggctgctgcaggttcatgctctggagctgtcccaagGGCTGCTCTCCAGCCCTTgg                                                                                                                                >  2:2949533‑M1/130‑149 (MQ=255)
                    acagcctgttcgaacgtggcccgcgtgaagttcgcccaaccgcacaggccttggccctggagccacacgccaggctgattgccgaacaactggggctgctgcaggttcatgctctggagctgtcccaagGGCTGCTCTCCAGCCCTTgg                                                                                                                                <  1:2949533‑M1/20‑1 (MQ=255)
                          gCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAAAATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCt                                                                                                                        <  2:801438/150‑1 (MQ=255)
                              ggCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCag                                                                                                                    >  1:659424/1‑150 (MQ=255)
                              ggCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCag                                                                                                                    >  2:2944923/1‑150 (MQ=255)
                              ggCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCag                                                                                                                    >  1:740635/1‑150 (MQ=255)
                              ggCTTCTTCCTGCGGGGCGCGGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTGGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCGCGTGGGACGGCTCCag                                                                                                                    >  1:182732/1‑150 (MQ=255)
                                 ttcttcCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTgg                                                                                                                                <  2:2953288/136‑1 (MQ=255)
                                 ttcttcCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTgg                                                                                                                                >  1:2953288/1‑136 (MQ=255)
                                 ttcttcCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGc                                                                                                                 <  2:1166674/150‑1 (MQ=255)
                                  tcttctTGCTGGGTTCGGAGCATCGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCa                                                                                                                <  2:659424/150‑1 (MQ=255)
                                  tcttcCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGTGACAGCTCCAGAGCa                                                                                                                <  2:359057/150‑1 (MQ=255)
                                  tcttcCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCa                                                                                                                <  1:1544257/150‑1 (MQ=255)
                                   cttcCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCAt                                                                                                               <  2:581814/150‑1 (MQ=255)
                                   cttcCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCAt                                                                                                               >  1:409761/1‑150 (MQ=255)
                                        tGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTACAGCCCTTGGGACAGCTCCAGAGCATGAAcc                                                                                                          >  2:270166/1‑150 (MQ=255)
                                            gggCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTgca                                                                                                      <  1:2331547/150‑1 (MQ=255)
                                             ggCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTgc                                                                                                       >  1:1014466/1‑148 (MQ=255)
                                             ggCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTgc                                                                                                       <  2:1014466/148‑1 (MQ=255)
                                                 cTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCagcagc                                                                                                 <  1:2666370/150‑1 (MQ=255)
                                                  tGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTgg                                                                                                                                >  1:1785341/1‑119 (MQ=255)
                                                     gCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCa                                                                                             >  1:36137/1‑150 (MQ=255)
                                                          gCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAgttgt                                                                                        <  1:2539432/150‑1 (MQ=255)
                                                            aaTATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTc                                                                                      >  2:1678526/1‑150 (MQ=255)
                                                             atatCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCg                                                                                     <  2:1978074/150‑1 (MQ=255)
                                                                 ccAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCaa                                                                                 <  1:2937320/150‑1 (MQ=255)
                                                                   aGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCa                                                                                                                <  2:1489187/117‑1 (MQ=255)
                                                                   aGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCa                                                                                                                >  1:1489187/1‑117 (MQ=255)
                                                                   aGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATc                                                                               <  2:1936230/150‑1 (MQ=255)
                                                                    gCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCa                                                                              >  2:1405533/1‑150 (MQ=255)
                                                                      aaTGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGcccc                                                                                              <  2:374332/132‑1 (MQ=255)
                                                                      aaTGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGcccc                                                                                              >  1:374332/1‑132 (MQ=255)
                                                                      aaTGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGc                                                                            >  2:2159813/1‑150 (MQ=255)
                                                                      aaTGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGc                                                                            >  1:298838/1‑150 (MQ=255)
                                                                       aTGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGcc                                                                           >  2:1172123/1‑150 (MQ=255)
                                                                            tGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCCTATACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCg                                                                      >  1:1570326/1‑150 (MQ=255)
                                                                                 cTTACATAGGTTAGCTATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGTCAAGCACGGGAGCAGTGTGGTCGCCAGCCCTTGGGACAGCTCCCGAGAATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTgg                                                                 <  1:701610/150‑1 (MQ=255)
                                                                                  ccacacgccaggctgattgccgaacaactggggctgctgcaggttcatgctctggagctgtcccaagGgctg                                                                                                                                               <  2:1899715‑M1/5‑1 (MQ=255)
                                                                                  ccacacgccaggctgattgccgaacaactggggctgctgcaggttcatgctctggagctgtcccaagGgctg                                                                                                                                               >  1:1899715‑M1/68‑72 (MQ=255)
                                                                                    aCCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCgg                                                                                    >  2:2628856/1‑128 (MQ=255)
                                                                                    aCCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCgg                                                                                    <  1:2628856/128‑1 (MQ=255)
                                                                                    aCCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTc                                                              >  2:2829961/1‑150 (MQ=255)
                                                                                      cTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTgca                                                                                                      <  1:782434/108‑1 (MQ=255)
                                                                                      cTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTgca                                                                                                      >  2:782434/1‑108 (MQ=255)
                                                                                      cTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCt                                                                          <  2:1296938/136‑1 (MQ=255)
                                                                                      cTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCt                                                                          >  1:1296122/1‑136 (MQ=255)
                                                                                      cTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCt                                                                          >  1:1296938/1‑136 (MQ=255)
                                                                                      cTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCt                                                                          <  2:1296122/136‑1 (MQ=255)
                                                                                      cTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTACTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGGAGTGCGGCAAGCAGCCTGGCGTGTGGCTCCa                                                            >  2:1695015/1‑150 (MQ=255)
                                                                                        aGGTTGGCGGTTGCCGCCAGCAGCGGGCGGTGATCGATGGCGGGTGCCGCTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGTCGGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGGTCGGCAATCAGCCTGGGGTGGGGCTCCAgg                                                          <  2:779970/150‑1 (MQ=255)
                                                                                        aGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAgg                                                          <  2:637575/150‑1 (MQ=255)
                                                                                         ggTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAggg                                                         <  1:1377797/150‑1 (MQ=255)
                                                                                         ggTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAggg                                                         <  1:2321558/150‑1 (MQ=255)
                                                                                          gTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGc                                                        <  1:2944923/150‑1 (MQ=255)
                                                                                            ggctgattgccgaacaactggggctgctgcaggttcatgctctggagctgtcccaagGGCTGCTCTCCAGCCCTTGGGa                                                                                                                              <  2:2425476‑M1/22‑1 (MQ=255)
                                                                                            ggctgattgccgaacaactggggctgctgcaggttcatgctctggagctgtcccaagGGCTGCTCTCCAGCCCTTGGGa                                                                                                                              >  1:2425476‑M1/58‑79 (MQ=255)
                                                                                                gATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGTATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGc                                                  <  2:2340834/150‑1 (MQ=255)
                                                                                                gATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCgtgt                                                                   <  1:2416419/133‑1 (MQ=255)
                                                                                                       gaacaactggggctgctgcaggttcatgctctggagctgtcccaagGGCTGCTCTCCAGCCCTTg                                                                                                                                 >  2:1610835‑M1/47‑65 (MQ=255)
                                                                                                        ccAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCgg                                          <  1:270166/150‑1 (MQ=255)
                                                                                                         cagcagCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGt                                         <  1:2159813/150‑1 (MQ=255)
                                                                                                          agcagcGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACACCTTACGGCGCAGAAGCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGtt                                        <  2:1642226/150‑1 (MQ=255)
                                                                                                            cagcGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTgg                                      <  2:409761/150‑1 (MQ=255)
                                                                                                                 ggcggTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGaa                                 <  2:1096951/150‑1 (MQ=255)
                                                                                                                  gcggTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGCCCAAGGCCTGTGCGGTTGGGCGAAc                                <  1:1678526/150‑1 (MQ=255)
                                                                                                                        aTCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCAcg                          >  1:663591/1‑150 (MQ=255)
                                                                                                                               tCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGt                                         >  1:2604552/1‑128 (MQ=255)
                                                                                                                               tCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGt                                         <  2:2604552/128‑1 (MQ=255)
                                                                                                                                   gTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGtt               >  2:555867/1‑150 (MQ=255)
                                                                                                                                    tGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTc              <  2:2380210/150‑1 (MQ=255)
                                                                                                                                       cACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGaa           >  1:490086/1‑150 (MQ=255)
                                                                                                                                       cACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGaa           >  2:2773034/1‑150 (MQ=255)
                                                                                                                                       cACTGCCAGGGTCAGGCTGCTCTACAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGaa           >  2:1302715/1‑150 (MQ=255)
                                                                                                                                        aCTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAAc          >  1:1904459/1‑150 (MQ=255)
                                                                                                                                        aCTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAAc          >  1:2585282/1‑150 (MQ=255)
                                                                                                                                          tGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAg        <  2:1904459/150‑1 (MQ=255)
                                                                                                                                           gCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAgg       <  1:1468017/150‑1 (MQ=255)
                                                                                                                                             cAGGGTCAGGCTGCTATCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGc                                    <  2:2808156/119‑1 (MQ=255)
                                                                                                                                             cAGGGTCAGGCTGCTATCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGc                                    >  1:2808156/1‑119 (MQ=255)
                                                                                                                                                ggTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAgt                                                                                           >  1:1408123/1‑61 (MQ=255)
                                                                                                                                                ggTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAgt                                                                                           <  2:1408123/61‑1 (MQ=255)
                                                                                                                                                ggTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGt   <  2:2071338/149‑1 (MQ=255)
                                                                                                                                                ggTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGt   >  1:2071338/1‑149 (MQ=255)
                                                                                                                                                ggTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGTa  <  1:1405533/150‑1 (MQ=255)
                                                                                                                                                ggTCAGGCTGCTCTCCAGCCCCTGGATGACTGCCAGAGCATGAAGCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGTa  <  1:1541003/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
GTCGGCACGGCCGCTGTCCAGCAAGTGCAGGGCTTCTTCCTGCGGGGCGCTGAGCAGGGCAATATCCAGCAATGGGTGGCGCTTACCTAGGTTGGCGATGGCCGCCAGCAGCGGGCGGTGATCGATGTCGGGTGCCACTGCCAGGGTCAGGCTGCTCTCCAGCCCTTGGGACAGCTCCAGAGCATGAACCTGCAGCAGCCCCAGTTGTTCGGCAATCAGCCTGGCGTGTGGCTCCAGGGCCAAGGCCTGTGCGGTTGGGCGAACTTCACGCGGGCCACGTTCGAACAGGCTGTA  >  NC_002947/2567539‑2567832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.