| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2887594 | 87 (0.760) | 9 (0.090) | 9/220 | NT | 10.1% | coding (1118/1425 nt) | PP_2542 | GntR family transcriptional regulator |
| ? | NC_002947 | = 2887609 | 82 (0.790) | coding (1103/1425 nt) | PP_2542 | GntR family transcriptional regulator | |||||
GCCTTTCTCCAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2887434‑2887594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctggcgcaAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGACAGTGCCGCG < NC_002947/2887609‑2887461 GCCTTTCTCCAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAG < 2:2581324/150‑1 CCTTTCTCCAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGG < 2:304225/150‑1 CCTTTCTCCAGCGCATCGTCCAGCAACGCGGCACTGTCGGAGATGGCCGGATGGAGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGG > 2:2410719/1‑150 cgaTCTCCAGCGCATCGTCCAGCAACGCGGCACTCTCGGAAATCGCCGGATGGCGTGTCCAGATGTACACGCCTCCATCCGATTCGGTGAACAATTCAAAGCCCAGTAGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGC < 2:1191262/147‑1 CTCCAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTG < 2:2414584/150‑1 TCCAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGG > 2:2615827/1‑150 TCCAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGG > 2:837628/1‑150 TCCAGCGCAGCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGG < 1:911143/150‑1 CAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGGGCAGTAGATGCAGATGACGGCCAACTTCCTGATGCGCCTCGGTCAGGCGagatcg > 1:1191262/1‑144 CAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCG > 2:784735/1‑150 AGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGC > 1:1050687/1‑150 GCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGCAAGCACCTCAAGCGCCTG > 1:3063367/1‑150 GGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGC > 1:174938/1‑130 GGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGC < 2:174938/130‑1 CACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGCAAGCACCTCAAGCGCCTGCGCC < 2:3063367/150‑1 TGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGCTGCAGATGCCGGCCAACTTCCTGATCCTCCTCGTCCAGGCGCTGGCGCAAGCACCTCAAGCGCCTGCGCCAGC < 1:837628/150‑1 CCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCGGGCGCTGGCGCAAGCACCTCAAGC < 1:673207/126‑1 CCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCGGGCGCTGGCGCAAGCACCTCAAGC > 2:673207/1‑126 TGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGCAAGCACCTCAAGCGCCTGCGCCAG < 2:2327137/95‑1 TGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGCAAGCACCTCAAGCGCCTGCGCCAG > 1:2327137/1‑95 GCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGCAAGCACCTCAAGCGCCTGCGC < 2:2142229/79‑1 GCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGCAAGCACCTCAAGCGCCTGCGC > 1:2142229/1‑79 CGCTGGCGCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGGATGTACATCTAGACACGCCATCCGGATATTCCCGAC > 2:19606/1‑150 CGCTGGCGCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGAC < 1:1526655/150‑1 TGGCGCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGACAGT > 1:784735/1‑150 GCGCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTT < 2:163020/90‑1 GCGCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTT > 1:163020/1‑90 GCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGACAGTGCCG > 1:23016/1‑150 GCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGACAGTGCCG > 1:1767243/1‑150 GCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGACAGTGCCG > 2:2634320/1‑150 GCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGAC < 1:799805/121‑1 GCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGAC > 2:799805/1‑121 GCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATT > 1:2885708/1‑85 GCAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATT < 2:2885708/85‑1 CAAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGACAGTGCCGC < 1:1154665/150‑1 AAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTGGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGACAGTGCCGCG > 2:1276347/1‑150 GCCTTTCTCCAGCGCATCGTCCAGCAACGCGGCACTGTCGGGAATCGCCGGATGGCGGGTCCAGATGTACATGCCTTCATCCGATTCGGTGAACAATTCAAAGCCCAGTCGATGCAGATGCCGGCCAACTTCCTGATGCGCCTCGGCCAGGCGCTGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2887434‑2887594‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctggcgcaAGCACCTCAAGCGCCTGCGCCAGCGCCTGGCCGAGGCGCATCAGGAAGTTGGCCGGCATCTGCATCGACTGGGCTTTGAATTGTTCACCGAATCGGATGAAGGCATGTACATCTGGACCCGCCATCCGGCGATTCCCGACAGTGCCGCG < NC_002947/2887609‑2887461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |