| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3142930 = | 97 (0.850) | 6 (0.060) | 6/224 | NT | 6.9% | coding (836/1029 nt) | PP_2758 | ribose ABC transporter substrate‑binding protein |
| ? | NC_002947 | 3142976 = | 72 (0.690) | coding (882/1029 nt) | PP_2758 | ribose ABC transporter substrate‑binding protein | |||||
GTTGCCCGCCGTGGTCAGCAGGGTCTCGACGAAGGTTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3143087‑3142930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcagcaGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGA > NC_002947/3142976‑3143123 GTTGCCCGCCGTGGTCAGCAGGGTCTCGACTAAGGTTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTG > 1:848797/1‑150 TTGCCCGCCGTGGTCAGCAGGGTCTCGACGAAGGTTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGG < 1:538117/150‑1 CCGCCGTGGTCAGCAGGGTCTCGACGAAGGTTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCA > 1:1322687/1‑150 AGCAGGGTCTCGACGATGGTTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCG > 1:2073681/1‑137 AGCAGGGTCTCGACGATGGTTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCG < 2:2073681/137‑1 TTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTG > 2:932247/1‑115 TTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTG < 1:932247/115‑1 GATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCA < 1:2594657/108‑1 GATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCA > 2:2594657/1‑108 TGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGG > 1:965690/1‑150 GCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGA > 1:1916936/1‑132 GCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGA < 2:1916936/132‑1 CTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCG > 2:2949261/1‑150 CACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCCCGCAAGCCCTGCTGACCACGGCGGGCAAC > 1:252/1‑150 TGCAGCCACCGGGCTGCCGGGCTGGCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGAT < 2:965690/150‑1 TGGCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGTGGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGTAACGTCGATGACGTCAAACGCATCCGAGGCG > 1:244254/1‑150 GGCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGA < 2:2361597/150‑1 GCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGAC > 1:276616/1‑129 GCGCAGCAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGAC < 2:276616/129‑1 GCGCAGCAGCCTGCGTTGATCGGCCGTACGGAGGTGAATAACGTCGCCCGCTACCTGGCCGGCGAGCACTATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGAC > 2:2762495/1‑150 CAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGA < 2:538117/150‑1 CAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGA < 2:617510/150‑1 CAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGA < 1:1637903/150‑1 CAGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCGACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGCCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGA < 1:2655597/150‑1 GTTGCCCGCCGTGGTCAGCAGGGTCTCGACGAAGGTTTCGGGCGGCAGATCGTGCTCGCCGGCCAGGTAGCGGGCGACGTTATGCACCGCCGTACGGCCGATCAACGCAGGCTGCTGCGCCACCACTGCAGCCACCGGGCTGCCGGGCTGGCGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3143087‑3142930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcagcaGCCTGCGTTGATCGGCCGTACGGCGGTGCATAACGTCGCCCGCTACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGA > NC_002947/3142976‑3143123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |