New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4717234 | 108 (0.940) | 6 (0.050) | 5/242 | NT | 5.1% | coding (280/516 nt) | fabA | 3R‑3‑hydroxydecanoyl‑ACP dehydratase |
? | NC_002947 | = 4717255 | 114 (1.000) | coding (301/516 nt) | fabA | 3R‑3‑hydroxydecanoyl‑ACP dehydratase |
TGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGAAGGCGATCCGGTAATGCCGGGCTGCCTGGGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4717127‑4717234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCCGGCAGGCCCTGCCAGCCGAGGAA < NC_002947/4717255‑4717231 TGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGAAGGCGATCCGGTAATGCCGGGCTGCCTGGGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCTTCCCCGGCAGGCCCTGCCAGCCGAGGAA > 1:765274/1‑133 TGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGAAGGCGATCCGGTAATGCCGGGCTGCCTGGGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCTTCCCCGGCAGGCCCTGCCAGCCGAGGAA < 2:765274/133‑1 GCCGGGCTGCCTGGGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCTTCCCCGGCAGGCCCTGCCAGCCGAGGA > 1:203555/1‑74 GCCGGGCTGCCTGGGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCTTCCCCGGCAGGCCCTGCCAGCCGAGGA < 2:203555/74‑1 GGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCTTCCCCGGCAGGCCCTGCCAGCCGAGGAA < 1:2259888/62‑1 GGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCTTCCCCGGCAGGCCCTGCCAGCCGAGGAA > 2:2259888/1‑62 TGGATATCAACCCGGACCTGTGGTTCTTCGCCTGCCATTTCGAAGGCGATCCGGTAATGCCGGGCTGCCTGGGCCTCGACGCCATGTGGCAGCTGGTTGGCTTCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4717127‑4717234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCCGGCAGGCCCTGCCAGCCGAGGAA < NC_002947/4717255‑4717231 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |