| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5035308 | 0 (0.000) | 6 (0.060) | 6/232 | NT | 100% | coding (1300/1536 nt) | PP_4439 | transposase |
| ? | NC_002947 | = 5038236 | NA (NA) | coding (1280/1536 nt) | PP_4443 | transposase | |||||
ATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5035155‑5035308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcgTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTC < NC_002947/5038236‑5038089 ATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCC < 1:2392976/150‑1 GCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAANGCTNGGNAGCGCTGACGCGNTACCTGGACGATGGGGCTGTGCCCATC < 1:2847815/150‑1 GCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATC < 1:109357/150‑1 GCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATC < 2:625299/150‑1 GCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATC > 2:451724/1‑150 GCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATC < 2:2727655/150‑1 GCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATC < 2:2311512/150‑1 TGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCGTCC < 2:2164015/150‑1 AACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATC > 1:2300116/1‑90 AACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATC < 2:2300116/90‑1 CCTGGACGATGGGGCTGTGCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTT < 1:2913280/97‑1 CCTGGACGATGGGGCTGTGCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTT > 2:2913280/1‑97 TGGACGATGGGGCTGTGCCCATCGTCCAGGTAGCGCGTCAGCGCTAC > 1:416672/1‑47 TGGACGATGGGGCTGTGCCCATCGTCCAGGTAGCGCGTCAGCGCTAC < 2:416672/47‑1 ACGATGGGGCTGTGCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTG > 1:2444028/1‑93 ACGATGGGGCTGTGCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTG < 2:2444028/93‑1 CATCGTCCAGGTAGCGCGTCAGCGCTACGCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTA > 2:188476/1‑150 CATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTA > 2:1372745/1‑150 CATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTA > 1:2286435/1‑150 CATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGG < 2:1029305/95‑1 CATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGG > 1:1029305/1‑95 ATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTAT > 1:724678/1‑150 TCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATT < 1:2787884/150‑1 CGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTC < 2:1351440/150‑1 CGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTC < 1:667628/150‑1 GTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCA < 1:418823/35‑1 GTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCA > 2:418823/1‑35 ATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCTGAAACGCTGGGTAGCGCTGACGCGCTACCTGGACGATGGGGCTGTGCCCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5035155‑5035308‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcgTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAGTCGAGGGCTTTGGCTGTGGCTGATCCGTTGGGCACCAGGTCACGCTGGGCCAACATCCACTCATGCAGTGTTTTGCTGATCGGTACCGCCAGTTCCTGCCGTATTC < NC_002947/5038236‑5038089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |