| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5339636 | 146 (1.280) | 8 (0.070) | 7/240 | NT | 5.2% | coding (816/1383 nt) | pcnB | poly(A) polymerase |
| ? | NC_002947 | = 5339656 | 148 (1.310) | coding (836/1383 nt) | pcnB | poly(A) polymerase | |||||
TTACCTGCCGATTCGCGGCCTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5339486‑5339636‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgTCCAGCGCGTGGGCACTGGCCGGGAACAGTGGTTCGAACAACTCCAGGTCAACCAGCATTTCGAAGGCGATGGCACCTTGGCCGCTGAGGAACAGCTTGAGGCATTCCTCGAACAGGCGCGCGGGTGGAATCTCGCGCAGCATCGGGGC < NC_002947/5339656‑5339508 TTACCTGCCGATTCGCGGCCTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCC < 2:2754004/150‑1TTACCTGCCGATTCGCGGCCTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCC < 2:2588779/150‑1TTACCTGCCGATTCGCGGCCTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCC < 2:2346910/150‑1TTACCTGCCGATTCGCGGCCTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCC < 1:1043946/150‑1 TACCTGCCGATTCGCGGCCTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCG < 1:384645/150‑1 TACCTGCCGATTCGCGGCCTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCG < 2:12241/150‑1 CTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCGTCCAGCGCGTGGGCACTG > 1:2847278/1‑150 TGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCGTCCAGCGCGTGGGCACTGGCCGGGAACAGTG < 2:2847278/150‑1 TTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCGTCCAGCGCGTGGGCACTGGCCGG > 1:1581362/1‑116 TTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCGTCCAGCGCGTGGGCACTGGCCGG < 2:1581362/116‑1 CCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCGTCCAGCGCGTGGGCACTGGCCGGGAACAGTG < 2:1174031/113‑1 CCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCGTCCAGCGCGTGGGCACTGGCCGGGAACAGTG > 1:1174031/1‑113 CCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCGTCCAGCGCGTGGGCACTGGCCGGGAACA < 2:1340388/98‑1 CCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCGTCCAGCGCGTGGGCACTGGCCGGGAACA > 1:1340388/1‑98 GTCCAGCGCGTGGGCACTGGCCGGGAACAGTGGTTCGAACAACTCCAGGTCAACCAGCATTTCGAAGGCGATGGCACCTTGGCCGCTGAGGAACAGCTTGAGACATTCCTCGAACAGGCGCGCGGGTGGAATCTCGCGCAGCATCGGGGC < 1:2013001/150‑1 GTCCAGCGCGTGGGCACTGGCCGGGAACAGTGGTTCGAACAACTCCAGGTCAACCAGCATTTCGAAGGCG > 1:2703054/1‑70 GTCCAGCGCGTGGGCACTGGCCGGGAACAGTGGTTCGAACAACTCCAGGTCAACCAGCATTTCGAAGGCG < 2:2703054/70‑1 TTACCTGCCGATTCGCGGCCTGGCCCCGATGCTGCGCGAGATTCCACCCGCGCGCCTGTTCGAGGAATGCCTCAAGCTGTTCCTCAGCGGCCAAGGTGCCATCGCCTTCGAAATGCTGGTTGACCTGGAGTTGTTCGAACCACTGTTCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5339486‑5339636‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgTCCAGCGCGTGGGCACTGGCCGGGAACAGTGGTTCGAACAACTCCAGGTCAACCAGCATTTCGAAGGCGATGGCACCTTGGCCGCTGAGGAACAGCTTGAGGCATTCCTCGAACAGGCGCGCGGGTGGAATCTCGCGCAGCATCGGGGC < NC_002947/5339656‑5339508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |