New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6032808 =67 (0.590)20 (0.240) 19/178 NT 40.9% intergenic (+16/+120) dppA‑IV/PP_5284 dipeptide transport protein/hypothetical protein
?NC_002947 6032890 = 9 (0.110)intergenic (+98/+38) dppA‑IV/PP_5284 dipeptide transport protein/hypothetical protein

Only 100 of 108 total aligned reads displayed.

TGATCCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGT  >  NC_002947/6032659‑6032878
                                                                                                                                                     |                                                                       
      ttgaagcgggggctggcgttgattgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCgg                                                                   >  2:1762092‑M1/144‑150 (MQ=255)
      ttgaagcgggggctggcgttgattgatgtgcgggcgctggatcacatcatcattggtgatggggatccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCgg                                                                   >  1:2402280‑M1/144‑150 (MQ=255)
      agcagcagGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCgg                                                                   <  1:2102150/150‑1 (MQ=255)
      agcagaagGCGCTGTGGGTGCAACTCGCTCACCCTACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAAGGTTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCgg                                                                   <  1:2832423/150‑1 (MQ=255)
       ggaagcgggggctggcgttgattgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCggg                                                                  >  2:701607‑M1/143‑150 (MQ=255)
       gcagcagGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATGTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCggg                                                                  <  1:2382823/150‑1 (MQ=255)
            cgggggctggcgttgattgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAAc                                                             >  2:1085915‑M1/138‑150 (MQ=255)
             gtcgcTTTGGGTGCACCTGGCGCACCCGACTGCGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAAccc                                                           <  1:1204322/148‑1 (MQ=255)
              gcgcTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAAcc                                                            <  1:1239160/149‑1 (MQ=255)
              gcgcTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAAcc                                                            >  2:1239160/1‑149 (MQ=255)
                 gctggcgttgattgatgtgcgggtgctggatcacatccacattggtcatggggagccgttgtcgatggtcgagcatgtctggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCt                                                        >  1:2217115‑M1/133‑150 (MQ=255)
                 gctggcgttgattgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCt                                                        >  1:1500648‑M1/133‑150 (MQ=255)
                 cTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTcg                                                                      <  2:1085926/136‑1 (MQ=255)
                 cTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTcg                                                                      >  1:1085926/1‑136 (MQ=255)
                  tgtgGGTGCCACTGGCGCACCCGACTGCTGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTc                                                       >  1:1187948/1‑150 (MQ=255)
                   gtgGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTcc                                                      <  1:2261323/150‑1 (MQ=255)
                      ggTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGGCCAGGTACGCCGGGACCTGCCGCGTCGCGGTGAAACCCGCTCCTAc                                                   >  2:807903/1‑150 (MQ=255)
                         gCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAgg                                                <  2:1114737/150‑1 (MQ=255)
                         gCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAgg                                                <  1:435737/150‑1 (MQ=255)
                           cACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAgggg                                              <  1:65039/150‑1 (MQ=255)
                           cACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAgggg                                              >  1:1639178/1‑150 (MQ=255)
                            ttgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTaaacccgcacatcaa                                                  >  2:1706397‑M1/122‑138 (MQ=255)
                            ttgatgtgcgggtgctggatcacatcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTaaacccgcacatcaa                                                  <  1:1706397‑M1/24‑8 (MQ=255)
                            aCTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGGCCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAggg                                               <  2:429253/148‑1 (MQ=255)
                            aCTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGt                                             >  2:1324318/1‑150 (MQ=255)
                             cTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTa                                            <  2:2678760/150‑1 (MQ=255)
                             cTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTa                                            <  2:2735736/150‑1 (MQ=255)
                               ggCGCACCGGACTGCCGCGACCTCGCTGCGACAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAgc                                          <  2:2805433/150‑1 (MQ=39)
                                      ccGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCggg                                                                  <  2:823268/119‑1 (MQ=255)
                                      ccGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCggg                                                                  >  1:823268/1‑119 (MQ=255)
                                      ccGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAggg                                               <  2:961875/138‑1 (MQ=255)
                                      ccGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAggg                                               >  1:961875/1‑138 (MQ=255)
                                       cGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCt                                  >  1:3006556/1‑150 (MQ=255)
                                        gACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTg                                 >  1:1026644/1‑150 (MQ=255)
                                           ggcggcGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCa                              <  2:801313/150‑1 (MQ=255)
                                           ggcggcGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCa                              <  2:801312/150‑1 (MQ=255)
                                                 gACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGAc                       <  1:476081/150‑1 (MQ=255)
                                                  aCCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACg                      <  2:1187948/150‑1 (MQ=255)
                                                   ccTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCt                                                        <  2:1826288/116‑1 (MQ=255)
                                                   ccTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCt                                                        >  1:1826288/1‑116 (MQ=255)
                                                   atcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCgg                                                                   >  2:1477442‑M1/99‑105 (MQ=255)
                                                   atcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCgg                                                                   <  1:1477442‑M1/7‑1 (MQ=255)
                                                   atcatcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtaccggcctcTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGc                     >  2:2582607‑M1/99‑150 (MQ=255)
                                                    cTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGAc                       >  1:2911871/1‑147 (MQ=255)
                                                    cTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGAc                       <  2:2911871/147‑1 (MQ=255)
                                                     ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCgg                                                                   >  2:1503681/1‑103 (MQ=255)
                                                     ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCgg                                                                   <  1:1503681/103‑1 (MQ=255)
                                                     ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTa                   <  1:1859904/150‑1 (MQ=255)
                                                     ttGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTa                   <  2:2222633/150‑1 (MQ=255)
                                                     catcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCggg                                                                  <  1:2939538‑M1/8‑1 (MQ=255)
                                                     catcattggtgatggggagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCggg                                                                  >  2:2939538‑M1/97‑104 (MQ=255)
                                                      tgctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  <  1:2539658/150‑1 (MQ=255)
                                                      atcattggtgatggggagccgttgtcgatggtcgagcatgtgtggattgtggtctgagggagtactgagagccttatagggtcagtaccggcctcTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  >  1:438309‑M1/96‑150 (MQ=255)
                                                        ctgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCCCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAccc                <  2:776208/150‑1 (MQ=255)
                                                         tgcGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCTGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAcccc               >  2:1192176/1‑150 (MQ=255)
                                                           cgcCAAGGCGTCGAGGGGTACCAGGTTAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCACTg             <  2:112053/150‑1 (MQ=255)
                                                            ggtgatggggagccgtggtcgatggtcgagcatgggtggattgtggtctgagggagtaccgagagccttatagggtcagtacgggccctTTCGCGGGTCTCCCCGCTCCTACAGGGGTAGCGCCAGCTTGGCAGTTGACGCTACCCCTGt            >  2:2736349‑M1/90‑150 (MQ=255)
                                                             ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTa           <  1:1324318/150‑1 (MQ=255)
                                                             ccAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTa           <  1:2078726/150‑1 (MQ=255)
                                                              cAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAg          <  2:2965041/150‑1 (MQ=255)
                                                                  gCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAg                                                 <  1:906722/108‑1 (MQ=255)
                                                                  gCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAg                                                 >  2:906722/1‑108 (MQ=255)
                                                                    gTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCTGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg    <  1:1192176/150‑1 (MQ=255)
                                                                    gTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg    <  2:1639178/150‑1 (MQ=255)
                                                                     tCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCAACTGCCAGGCTGGCGCTACCCCTGTAGGAGCggg   <  2:609346/150‑1 (MQ=21)
                                                                     gagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  <  2:2677782‑M1/55‑1 (MQ=255)
                                                                     gagccgttgtcgatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  >  1:2677782‑M1/81‑135 (MQ=255)
                                                                      cGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGt  <  2:3006556/150‑1 (MQ=255)
                                                                      cGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGt  <  2:2387790/150‑1 (MQ=255)
                                                                                gatggtcgagcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAAc                                                             >  1:1679241‑M1/70‑82 (MQ=255)
                                                                                cAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGt            >  2:2628330/1‑130 (MQ=255)
                                                                                cAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGt            <  1:2628330/130‑1 (MQ=255)
                                                                                 aGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTcgcg                                                                    <  2:623828/74‑1 (MQ=255)
                                                                                 aGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTcgcg                                                                    >  1:623828/1‑74 (MQ=255)
                                                                                 aGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGCCGCTACCCCTGTAGGAGCggg   <  1:338253/138‑1 (MQ=255)
                                                                                 aGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCggg   >  2:338253/1‑138 (MQ=255)
                                                                                        cccGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg    >  1:2803697/1‑130 (MQ=255)
                                                                                        cccGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCgg    <  2:2803697/130‑1 (MQ=255)
                                                                                         gcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCa                              >  1:1000842‑M1/61‑104 (MQ=255)
                                                                                         gcatgggtggattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCa                              <  2:1000842‑M1/44‑1 (MQ=255)
                                                                                                  gattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTc                                                                       <  1:1429070‑M1/3‑1 (MQ=255)
                                                                                                  gattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTc                                                                       >  2:1429070‑M1/52‑54 (MQ=255)
                                                                                                  gattgtggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  <  2:2535330‑M1/55‑1 (MQ=255)
                                                                                                      tGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTgg                                >  2:2872590/1‑89 (MQ=255)
                                                                                                      tGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTgg                                <  1:2872590/89‑1 (MQ=255)
                                                                                                       tggtctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTa           >  2:3063242‑M1/47‑108 (MQ=255)
                                                                                                       tgatctgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTa           <  1:3063242‑M1/62‑1 (MQ=255)
                                                                                                            tgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGc                     >  2:2494232‑M1/42‑93 (MQ=255)
                                                                                                            tgagggagtactgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGc                     <  1:2494232‑M1/52‑1 (MQ=255)
                                                                                                                   ggtgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  <  1:780142/89‑1 (MQ=255)
                                                                                                                   ggtgacggtgacCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  >  2:780142/1‑89 (MQ=255)
                                                                                                                       tgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCt                    >  1:2612408‑M1/31‑83 (MQ=255)
                                                                                                                       tgagagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCt                    <  2:2612408‑M1/53‑1 (MQ=255)
                                                                                                                          gagccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAcc                 >  1:982879‑M1/28‑83 (MQ=255)
                                                                                                                             ccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  <  1:2737494‑M1/55‑1 (MQ=255)
                                                                                                                             ccttatagggtcagtacgggccctTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTAc                  >  2:2737494‑M1/25‑79 (MQ=255)
                                                                                                                                      gCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAgc                                          <  1:926065/47‑1 (MQ=255)
                                                                                                                                      gCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAgc                                          >  2:926065/1‑47 (MQ=255)
                                                                                                                                                     TTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTa           >  2:1079755‑M1/1‑62 (MQ=255)
                                                                                                                                                     TTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTa           <  1:1079755‑M1/62‑1 (MQ=255)
                                                                                                                                                     |                                                                       
TGATCCAGCAGCAGGCGCTGTGGGTGCCACTGGCGCACCCGACGGCGGCGACCTTGCTGCGCCAAGGCGTCGAGGGGTACCAGGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGTTGACGCTACCCCTGTAGGAGCGGGT  >  NC_002947/6032659‑6032878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.