New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 425438493 (0.810)6 (0.050) 5/240 NT 6.0% coding (1788/2253 nt) PP_3728 two‑component system sensor histidine kinase/response regulator
?NC_002947 = 4254434 95 (0.840)coding (1738/2253 nt) PP_3728 two‑component system sensor histidine kinase/response regulator

Only 100 of 115 total aligned reads displayed.

TACGTCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGACCGTCGCGCATCAGC  >  NC_002947/4254285‑4254582
                                                                                                                                                      |                                                                                                                                                    
tACGTCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGa                                                                                                                                                      <  2:1083567/150‑1 (MQ=255)
  cGTCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGCTGCCCGACGCCCTGGCAAGAGTGTACGCCTTCGGTCATT‑TCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGc                                                                                                                                                    <  1:835572/150‑1 (MQ=255)
    tCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTa                                                                                                                                                  >  2:1764072/1‑150 (MQ=255)
      aGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACg                                                                                                                                                >  2:16099/1‑150 (MQ=255)
        ccAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCa                                                                                                                                              <  2:1176233/150‑1 (MQ=255)
          aaCGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGGCCTGGCCCGGTTGCACGCCGGCCG‑CTGCTTGAAAAAACCAACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGc                                                                                                                                            >  1:2215116/1‑150 (MQ=255)
          aaCGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACTCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGc                                                                                                                                            >  1:2447282/1‑150 (MQ=255)
               cTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCg                                                                                                                                       <  1:20783/150‑1 (MQ=255)
                    gcAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTTGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCAGcaca                                                                                                                                  >  2:330939/1‑150 (MQ=255)
                      aGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAAc                                                                                                                                <  2:347928/150‑1 (MQ=255)
                       ggCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCGCAACg                                                                                                                               >  1:2448345/1‑150 (MQ=255)
                        gCTGTCCAGTCGCAACGGCTTGGCCAGTACGCCCTGCATCCCAGGGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGc                                                                                                                              >  1:19118/1‑150 (MQ=255)
                        gCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGc                                                                                                                              >  1:568452/1‑150 (MQ=255)
                          tGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCa                                                                                                                            <  1:1162287/150‑1 (MQ=255)
                           gTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGc                                                                                                                              >  1:820104/1‑147 (MQ=255)
                           gTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGc                                                                                                                              <  2:820104/147‑1 (MQ=255)
                                 ccGCAACGGCTTGGCCAGTACGCCCTGCATACCAGAGTCCCGCTGCATCGTGTCCTGTTCCGGGTGCACGCCTCCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCt                                                                                                                     >  1:2363310/1‑150 (MQ=255)
                                  cGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCCCAACGCCACCCCGCTc                                                                                                                    <  1:2431237/150‑1 (MQ=255)
                                        ggCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGACAGA‑GCGAGGATCCGACTGTGAAGGTTCAGCCACGGAGCGCTACACATCTGTCGGCACAACGCCACCCCGCTCATGccc                                                                                                              >  1:1454045/1‑150 (MQ=255)
                                           ttGGCCAGTACGCCCTGCATACCGGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTAc                                                                                                                                                 <  1:2066972/112‑1 (MQ=255)
                                              gCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAg                                                                                                        >  1:1438988/1‑150 (MQ=255)
                                                aaGTAAGCCCAGCATACCATCTTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTg                                                                                                      <  1:45510/149‑1 (MQ=255)
                                                   tACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCAc                                                                                                   >  1:2284553/1‑150 (MQ=255)
                                                   tACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCAc                                                                                                   <  2:821128/150‑1 (MQ=255)
                                                   tACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCAc                                                                                                   <  1:744803/150‑1 (MQ=255)
                                                   tACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTCGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCAc                                                                                                   >  2:105282/1‑150 (MQ=255)
                                                      gCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTc                                                                                                >  2:1514779/1‑150 (MQ=255)
                                                        ccTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCACCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCca                                                                                              >  1:335736/1‑150 (MQ=255)
                                                         cTGCATACCAGCGTCCAGATAGCCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCcag                                                                                             <  2:19118/150‑1 (MQ=255)
                                                         cTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCATGTCcag                                                                                             >  1:582088/1‑150 (MQ=255)
                                                                 cAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAAc                                                                                       <  1:758773/148‑1 (MQ=255)
                                                                 cAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAAc                                                                                       >  2:758773/1‑148 (MQ=255)
                                                                 cAGCGTCCAGATAACCCGCGACCTGGCCCAGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCa                                                                                     >  1:2954837/1‑150 (MQ=255)
                                                                         aGATAACCCGCGACCTGGCCCGGTTGCAAGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAATGCACGTCTTGCAGAACCAGGTCGAAg                                                                             <  1:2255942/150‑1 (MQ=255)
                                                                          gATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAgc                                                                            <  2:568452/150‑1 (MQ=255)
                                                                           aTAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCaa                                                                                                         >  2:607481/1‑120 (MQ=255)
                                                                           aTAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCaa                                                                                                         <  1:607481/120‑1 (MQ=255)
                                                                               cccGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGcgccgc                                                                       <  1:1802459/150‑1 (MQ=255)
                                                                                 cgcgACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCgg                                                                                                            >  2:780977/1‑111 (MQ=255)
                                                                                  gcgACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTgc                                                                    >  2:2977397/1‑150 (MQ=255)
                                                                                       cTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGc                                                                                                                                               >  1:300635/1‑70 (MQ=255)
                                                                                       cTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGc                                                                                                                                               <  2:300635/70‑1 (MQ=255)
                                                                                       cTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCa                                                               <  2:1500451/150‑1 (MQ=255)
                                                                                        tGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCAt                                                              <  1:1368040/150‑1 (MQ=255)
                                                                                          gCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCCGCTGTCGTCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGc                                                            >  2:884628/1‑150 (MQ=255)
                                                                                           cccGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGcc                                                           <  1:1764072/150‑1 (MQ=255)
                                                                                            ccGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGTGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCt                                                          >  2:107515/1‑150 (MQ=255)
                                                                                            ccGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCTGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCt                                                          >  1:216269/1‑150 (MQ=255)
                                                                                            ccGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCt                                                          >  1:386772/1‑150 (MQ=255)
                                                                                            ccGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCt                                                          >  1:2311550/1‑150 (MQ=255)
                                                                                               gTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGTgcaaccgggccaggtcgcgggttatctggacgctggtatgcagg                                                                                                          <  2:2058105‑M2/99‑45 (MQ=255)
                                                                                               gTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGTgcaaccgggccaggtcgcgggttatctggacgctggtatgcagg                                                                                                          >  1:2058105‑M2/1‑55 (MQ=255)
                                                                                               gTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAgcaaccgggccaggtcgcgggttatctggacgctggtatgcagggcgtactggccaagccgttgcggctggacagcctgcgcaaggcgttggctg                                                       <  2:2434013‑M2/150‑96 (MQ=255)
                                                                                               gTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAAc                                                                                                                                >  2:650550/1‑77 (MQ=255)
                                                                                               gTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAAc                                                                                                                                <  1:650550/77‑1 (MQ=255)
                                                                                               gTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCa                                                       >  1:544769/1‑150 (MQ=255)
                                                                                                ttGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAg                                                      >  1:2887989/1‑150 (MQ=255)
                                                                                                ttGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAg                                                      <  2:2311550/150‑1 (MQ=255)
                                                                                                ttGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAg                                                      <  1:1514779/150‑1 (MQ=255)
                                                                                                  gCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAgcaaccgggccaggtcgcgggttatctggacgctggtatgcagggcgtactggccaagccgttgcgg                                                                                   <  1:895150‑M2/119‑68 (MQ=255)
                                                                                                    aCGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGc                                                                                                     >  1:2665235/1‑99 (MQ=255)
                                                                                                    aCGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGc                                                                                                     <  2:2665235/99‑1 (MQ=255)
                                                                                                    aCGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTc                                                                                 <  2:3043195/119‑1 (MQ=255)
                                                                                                    aCGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTc                                                                                 >  1:3043195/1‑119 (MQ=255)
                                                                                                    aCGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGc                                                   >  1:1147673/1‑149 (MQ=255)
                                                                                                    aCGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCt                                                  >  1:2963712/1‑150 (MQ=255)
                                                                                                     ctccggccgTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCtt                                                 <  2:2447282/148‑1 (MQ=255)
                                                                                                      gcctgccgTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCGGGGCTtg                                                >  2:2298821/1‑150 (MQ=255)
                                                                                                       ccggccgTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTtgg                                               <  2:1959469/150‑1 (MQ=255)
                                                                                                        cggccgTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTtggc                                              <  2:1454045/150‑1 (MQ=255)
                                                                                                          gccgTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTtgggaa                                            <  1:107515/150‑4 (MQ=255)
                                                                                                            cgTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTtggctggc                                          <  2:216269/150‑1 (MQ=255)
                                                                                                            cgTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTtggctggc                                          <  2:2215116/150‑1 (MQ=255)
                                                                                                            cgTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTtggctggc                                          <  1:1517529/150‑1 (MQ=255)
                                                                                                              tCAGC‑GCCAGGATCCGACTGTGGAGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGt                                        >  2:2077676/1‑150 (MQ=255)
                                                                                                                 gc‑gcCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTTGCGTCtt                                     <  2:1300845/150‑1 (MQ=255)
                                                                                                                  gctccAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCtt                                     <  2:2306448/147‑1 (MQ=255)
                                                                                                                     ccAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCgg                                  >  1:1417772/1‑150 (MQ=255)
                                                                                                                         gATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAgc                                                                            <  2:1810834/104‑1 (MQ=255)
                                                                                                                         gATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAgc                                                                            >  1:1810834/1‑104 (MQ=255)
                                                                                                                         cagccGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCGCGCCAAGTGCACGTCCAGCAGATCCAGGCCGAAGCGCCGCTGCGCGCAGGCCTCCAGGCCGTGGCTGGCGTCTTCGGaaaa                              <  2:1539298/147‑1 (MQ=255)
                                                                                                                          aTCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAg                             <  1:1826045/150‑1 (MQ=255)
                                                                                                                              gACTGTGGCGGTTCGGCCCCGGCGAgcaaccgggccaggtcgcgggttatctggacgctggtatgcagggcgtactggccaagccgttgcggctggacagcctgcgcaaggcgttggctgacgtagcgcccggtgaagtggccagcgctg                         >  1:2434013‑M2/1‑25 (MQ=255)
                                                                                                                              gACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTa                         >  1:1539065/1‑150 (MQ=255)
                                                                                                                                cTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTAcc                       >  1:710440/1‑150 (MQ=255)
                                                                                                                                 tgtgGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTtggctggc                                          <  1:638964/130‑1 (MQ=255)
                                                                                                                                 tgtgGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTtggctggc                                          >  2:638964/1‑130 (MQ=255)
                                                                                                                                    ggCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGt                   <  1:2977397/150‑1 (MQ=255)
                                                                                                                                     gCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTAccc                      >  1:1247141/1‑146 (MQ=255)
                                                                                                                                     gCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTAccc                      <  2:1247141/146‑1 (MQ=255)
                                                                                                                                       ggTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCATGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGAc                <  2:582088/150‑1 (MQ=255)
                                                                                                                                             gCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCCTGCCCGGCAAGTGCACGTCCAGCAGAACTGCTGCAAAGCGCCGCTGAGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGTTCACCGTtgc          >  1:689744/1‑150 (MQ=255)
                                                                                                                                             gCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGACCGTcgc          >  1:1545673/1‑150 (MQ=255)
                                                                                                                                             gCCCCGGCGAGCTACGCAGCTGTCGATGCATCGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGACCGTcgc          >  1:1619646/1‑150 (MQ=255)
                                                                                                                                              ccccGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCCCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGACCGTcgcg         >  1:1300016/1‑150 (MQ=255)
                                                                                                                                                  ggCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAg                                                                             <  2:130185/78‑1 (MQ=255)
                                                                                                                                                  ggCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAg                                                                             >  1:130185/1‑78 (MQ=255)
                                                                                                                                                  ggCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGACCGTCGCGCATc     <  2:747810/150‑1 (MQ=255)
                                                                                                                                                   gCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGACCGTCGCGCATca    >  1:2857853/1‑150 (MQ=255)
                                                                                                                                                     gAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGACCGTCGCGCATcaac  >  2:23822/1‑148 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
TACGTCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGCCGTCAGC‑GCCAGGATCCGACTGTGGCGGTTCGGCCCCGGCGAGCTACGCAGCTGTCGGCACAACGCCACCCCGCTCATGCCCGGCAAGTGCACGTCCAGCAGAACCAGGTCGAAGCGCCGCTGCGCGCATGCCTGCAGGGCTTGGCTGGCGTCTTCGGCAAAGCTTACCCGGTGACCGTCGCGCATCAGC  >  NC_002947/4254285‑4254582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.