New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 387994 = | 47 (0.790) | 4 (0.070) | 4/232 | NT | 8.5% | coding (1131/1254 nt) | glyA‑I | serine hydroxymethyltransferase |
? | NC_002947 | 388011 = | 41 (0.710) | coding (1148/1254 nt) | glyA‑I | serine hydroxymethyltransferase |
GAGTAACGTTGCATGGTGTGTGACTCCACTCAGCGGTAGACAGGGAAATCTGCGCACAGGGCCGCGACGTTCTTCGCCACATCGGCTTCGACGTCTGCGTCACCGAGGTTGTCGAGGATGTCGCAAATCCAGCCAGCCAGGGCCACGCACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/388146‑387994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGCAACGTTACTCGGGCTTCGGCC > NC_002947/388011‑388157 GAGTAACGTTGCATGGTGTGTGACTCCACTCAGCGGTAGACAGGGAAATCTGCGCACAGGGCCGCGACGTTCTTCGCCACATCGGCTTCGACGTCTGCGTCACCGAGGTTGTCGAGGATGTCGCAAATCCAGCCAGCTAGGGCCACGCAC > 1:579699/1‑150 GGAAATCTGCGCACAGGGCCGCGACGTTCTTCGCCACATCGGCTTCGACGTCTGCGTCACCGAGGTTGTCGAGGATGTCGCAAATCCAGCCAGCCAGTGCGTGGCCCTGGCTGGCTGGATTTGC > 1:480668/1‑124 GGAAATCTGCGCACAGGGCCGCGACGTTCTTCGCCACATCGGCTTCGACGTCTGCGTCACCGAGGTTGTCGAGGATGTCGCAAATCCAGCCAGCCAGTGCGTGGCCCTGGCTGGCTGGATTTGC < 2:480668/124‑1 AGCCAGCCAGGGCCACGCACTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGT > 1:1357902/1‑58 AGCCAGCCAGGGCCACGCACTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGT < 2:1357902/58‑1 CTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGCAACGTTACTCGGGCTTCGGC > 2:1054544/1‑150 TGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGCAACGTTACTCGGGCTTCGGCC < 2:219854/150‑1 GAGTAACGTTGCATGGTGTGTGACTCCACTCAGCGGTAGACAGGGAAATCTGCGCACAGGGCCGCGACGTTCTTCGCCACATCGGCTTCGACGTCTGCGTCACCGAGGTTGTCGAGGATGTCGCAAATCCAGCCAGCCAGGGCCACGCACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/388146‑387994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGCAACGTTACTCGGGCTTCGGCC > NC_002947/388011‑388157 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |