New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	387994 =	47 (0.790)	4 (0.070)	4/232	NT	8.5%	coding (1131/1254 nt)	glyA‑I	serine hydroxymethyltransferase
	?	NC_002947	388011 =	41 (0.710)					coding (1148/1254 nt)	glyA‑I	serine hydroxymethyltransferase

GACTGGCAAAGACGCCGACGCCGCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGCAACG  >  NC_002947/387847‑388140                                                                                                                                                    |                                                                                                                                                   ggccgaagcccgagtaacgttgcatggtgtgtgactccactcagcggtagacagggaaatctgcgcacagggccgcgacgttcttcgccacatcggcttcgacgtctgcgtcaccgaggttgtcgaggatgtcgcaaatccagccagcca                                                                                                                                                  <  2:219854‑M1/3‑1 (MQ=255)  gccgaagcccgagtaacgttgcatggtgtgtgactccactcagcggtagacagggaaatctgcgcacagggccgcgacgttcttcgccacatcggcttcgacgtctgcgtcaccgaggttgtcgaggatgtcgcaaatccagccagccag                                                                                                                                                 >  2:1054544‑M1/147‑150 (MQ=255)    tGGCAAAGACGCCGACGCCGCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTg                                                                                                                                               >  2:5137/1‑150 (MQ=255)       cAAAGACGCCGACGCCGCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGt                                                                                                                                            <  2:1094679/150‑1 (MQ=255)       cAAAGACGCCGACGCCGCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGt                                                                                                                                            <  2:1094698/150‑1 (MQ=255)        aaaGACGCCGACGCCGCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTg                                                                                                                                           <  1:151199/150‑1 (MQ=255)         aaGACGCCGACGCCGCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTgg                                                                                                                                          >  1:1399721/1‑150 (MQ=255)               ccgacgccgCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCctgg                                                                                                                                    <  2:101688/150‑1 (MQ=255)                  acgccgCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCctggctg                                                                                                                                 <  1:31390/150‑1 (MQ=255)                  acgccgCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACCTCGGGCCTGCGTATCGCCACCCCCGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCctggctg                                                                                                                                 >  2:579699/1‑150 (MQ=255)                     ccgccCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCctggctggct                                                                                                                              <  2:1399721/150‑1 (MQ=255)                         ccTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGAt                                                                                                                          >  1:317518/1‑150 (MQ=255)                            gggTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGcc                                                                                                                                        >  1:379354/1‑133 (MQ=255)                            gggTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGcc                                                                                                                                        <  2:379354/133‑1 (MQ=255)                                   gcgcATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGCCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATc                                                                                                                <  1:785625/150‑1 (MQ=255)                                                  aacaaGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGt                                                                                                 >  2:1332515/1‑150 (MQ=255)                                                  aacaaGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGt                                                                                                 >  1:912201/1‑150 (MQ=255)                                                    caaGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGa                                                                                               >  2:473578/1‑150 (MQ=255)                                                                 ccGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGaa                                                                                  <  2:273942/150‑1 (MQ=255)                                                                   gAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCCCCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGc                                                                                <  2:1119193/150‑1 (MQ=255)                                                                   gAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGc                                                                                >  2:1311062/1‑150 (MQ=255)                                                                    aaCGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTg                                                                                                <  2:404317/133‑1 (MQ=255)                                                                    aaCGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTg                                                                                                >  1:404317/1‑133 (MQ=255)                                                                                  gCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCgaagaa                                                                 >  2:795722/1‑150 (MQ=255)                                                                                  gCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCgaagaa                                                                 >  1:219854/1‑150 (MQ=255)                                                                                                     cTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACg                                                                                             >  1:968597/1‑103 (MQ=255)                                                                                                     cTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACg                                                                                             <  2:968597/103‑1 (MQ=255)                                                                                                            tCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTcc                                       >  2:296552/1‑150 (MQ=255)                                                                                                            tCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTcc                                       >  1:290037/1‑150 (MQ=255)                                                                                                              ggCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCt                                     <  1:1539185/150‑1 (MQ=255)                                                                                                              ggCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCt                                     <  1:296552/150‑1 (MQ=255)                                                                                                               gCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTg                                    >  2:1509498/1‑150 (MQ=255)                                                                                                                 accgaggttgtcgaggatgtcgcaaatccagccagCCAGTGCGTGGCCctggctggct                                                                                                                              <  2:1357902‑M1/23‑1 (MQ=255)                                                                                                                 accgaggttgtcgaggatgtcgcaaatccagccagCCAGTGCGTGGCCctggctggct                                                                                                                              >  1:1357902‑M1/36‑58 (MQ=255)                                                                                                                    ccGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACACCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCtcc                               >  2:1003513/1‑148 (MQ=255)                                                                                                                      ggCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGAc                                                                                              <  2:726524/85‑1 (MQ=255)                                                                                                                      ggCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGAc                                                                                              >  1:726524/1‑85 (MQ=255)                                                                                                                       gCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGc                            >  2:1069343/1‑150 (MQ=255)                                                                                                                          gTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGa                         <  1:795722/150‑1 (MQ=255)                                                                                                                           ccaccacCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGAGCAGATTTCCCTGCCTACCGCTGAg                        >  1:1559440/2‑150 (MQ=255)                                                                                                                              ccaccCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTgg                     >  1:882025/1‑150 (MQ=255)                                                                                                                               caccCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGa                    <  1:473578/150‑1 (MQ=255)                                                                                                                               caccCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGa                    <  1:1332515/150‑1 (MQ=255)                                                                                                                                ccccACGGATTCAAGGTCGCCCAGTGCGGGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAg                   <  2:912201/149‑1 (MQ=255)                                                                                                                                accCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAg                   <  1:1509498/150‑1 (MQ=255)                                                                                                                                  ccGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTc                 >  1:485730/1‑150 (MQ=255)                                                                                                                                      ggCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTcacac             <  1:1311062/150‑1 (MQ=255)                                                                                                                                      gcaaatccagccagCCAGGGCCACGCACTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTcc                                       >  1:480668‑M1/15‑124 (MQ=255)                                                                                                                                      gcaaatccagccagCCAGGGCCACGCACTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTcc                                       <  2:480668‑M1/110‑1 (MQ=255)                                                                                                                                        cTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCacacac           >  2:1545758/1‑150 (MQ=255)                                                                                                                                         ttCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGt                       >  2:1013536/1‑137 (MQ=255)                                                                                                                                         ttCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGt                       <  1:1013536/137‑1 (MQ=255)                                                                                                                                             aGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGc      <  2:1260496/150‑1 (MQ=255)                                                                                                                                                  gCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGCAACg  >  2:1029264/1‑149 (MQ=255)                                                                                                                                                  gCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGCAACg  <  1:1029264/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GACTGGCAAAGACGCCGACGCCGCCCTGGGTCGTGCGCATATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGTTCGTCACTTCGGGCCTGCGTATCGGCACCCCGGCCGTCACCACCCGCGGCTTCAAGGTCGCCCAGTGCGTGGCCCTGGCTGGCTGGATTTGCGACATCCTCGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTCTACCGCTGAGTGGAGTCACACACCATGCAACG  >  NC_002947/387847‑388140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.