New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2562122 =	64 (1.070)	6 (0.110)	6/228	NT	8.7%	coding (70/594 nt)	PP_2245	Cro/CI family transcriptional regulator
	?	NC_002947	2562148 =	65 (1.140)					coding (44/594 nt)	PP_2245	Cro/CI family transcriptional regulator

GAGAATTCTAATATATGAGAATTTAGAAATGCGCAAGGGTCCAAGGTAAGATGCCCGACCACCGCCGCATGCCGAGATCCCTGAATGCCCGCAGCTCTTCCCCAGCTTGACCGTGCCGTCGTCGGCCAGCGCCTGCGCCAGGTGCGCAAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2562275‑2562122 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCCTGGC  >  NC_002947/2562148‑2562295                                                                                                                                                                                                                                                                                                                GAGAATTCTAATATATGAGAATTTAGAAATGCGCAAGGGTCCAAGGTAAGATGCCCGACCACCGCCGCATGCCGAGATCCCTGAATGCCCGCAGCTCTTCCCCAGCTTGACCGTGCCGTCGTCGGCCAGCGCCTGCGCCAGGTGCGCAAG                                                                                                                                                          <  2:751678/150‑1   GAATTCTAATATATGAGAATTTAGAAATGCGCAAGGGTCCAAGGTAAGATGCCCGACCACCGCCGCATGCCGAGATCCCTGAATGCCCGCAGCTCTTCCCCAGCTTGACCGTGCCGTCGTCGGCCAGCGCCTGCGCCAGGTGCGCAAGGC                                                                                                                                                        <  2:342155/150‑1   GAATTCTAATATATGAGAATTTAGAAATGCGCAAGGGTCCAAGGTAAGATGCCCGACCACCGCAGCATGCCGAGATCCCTGAATGCCCGCAGCTCTTCCCATGCTTGGCCGTGCCGTCCTCGGCCAGCGCCTGCGCCAGGTGCGCAAGGC                                                                                                                                                        <  1:730946/150‑1                                             GGTAAGATGCCCGACCACCGCCGCATGCCGAGATCCCTGAATGCCCGCAGCTCTTCCCCAGCTTGACCGTGCCGTCGTCGGCCAGCGCCTGCGCCAGGTGCGCAAGGC                                                                                                                                                        >  1:881574/1‑108                                             GGTAAGATGCCCGACCACCGCCGCATGCCGAGATCCCTGAATGCCCGCAGCTCTTCCCCAGCTTGACCGTGCCGTCGTCGGCCAGCGCCTGCGCCAGGTGCGCAAGGC                                                                                                                                                        <  2:881574/108‑1                                                                                                                            GGCCAGCGCCTGCGCCAGGTGCGCAAGGCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACC                                                                  <  1:1345753/115‑1                                                                                                                            GGCCAGCGCCTGCGCCAGGTGCGCAAGGCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACC                                                                  >  2:1345753/1‑115                                                                                                                              CCAGCGCCTGCGCCAGGTGCGCAAGGCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGC                                                                          <  1:1239997/105‑1                                                                                                                              CCAGCGCCTGCGCCAGGTGCGCAAGGCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGC                                                                          >  2:1239997/1‑105                                                                                                                                      TGCGCCAGGTGCGCAAGGCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCA                                                                                           <  1:936276/80‑1                                                                                                                                      TGCGCCAGGTGCGCAAGGCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCA                                                                                           >  2:936276/1‑80                                                                                                                                                     AGGCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCC      >  2:989262/1‑150                                                                                                                                                      GGCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCCT     <  1:1622057/150‑1                                                                                                                                                         GCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCCTGGC  >  1:662637/1‑150                                                                                                                                                                                                                                                                                                                GAGAATTCTAATATATGAGAATTTAGAAATGCGCAAGGGTCCAAGGTAAGATGCCCGACCACCGCCGCATGCCGAGATCCCTGAATGCCCGCAGCTCTTCCCCAGCTTGACCGTGCCGTCGTCGGCCAGCGCCTGCGCCAGGTGCGCAAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2562275‑2562122 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCCTGGC  >  NC_002947/2562148‑2562295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.