New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2562122 =	64 (1.070)	6 (0.110)	6/228	NT	8.7%	coding (70/594 nt)	PP_2245	Cro/CI family transcriptional regulator
	?	NC_002947	2562148 =	65 (1.140)					coding (44/594 nt)	PP_2245	Cro/CI family transcriptional regulator

AGCGCCCGCGCAGCAGCGGCCAGTTTTTCATAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCCTGGC  >  NC_002947/2562001‑2562295                                                                                                                                                     |                                                                                                                                                    aGCGCCCGCGCAGCAGCGGCCAGTTTTTCATAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGCGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTgg                                                                                                                                                   <  1:236243/150‑1 (MQ=255)      ccGCGCAGCAGCGGCCAGTTTTTCATAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTCGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCcgac                                                                                                                                              <  2:163446/150‑1 (MQ=255)         cgcAGCAGCGGCCAGTTTTTCATAGCTGACCGACACCTGTGCCCGTTCCACATTCGACAACTTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCgacgac                                                                                                                                           <  1:1601568/150‑1 (MQ=255)                   gCCAGTTTTTCATAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCa                                                                                                                                 >  2:1008276/1‑150 (MQ=255)                         ttttCATAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTgg                                                                                                                           <  1:877391/150‑1 (MQ=255)                         ttttCATAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTgg                                                                                                                           <  1:1497602/150‑1 (MQ=255)                              aTAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAag                                                                                                                      >  1:1298001/1‑150 (MQ=255)                               tAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAaga                                                                                                                     <  1:1008276/150‑1 (MQ=255)                                      ggtaagatgcccgaccaccgccgcatgccgagatccctgaatgcccgcagctcttccccagcttgaccgtgccgtcgtcggccaGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGcc                                                                                                                                                 >  2:1345753‑M1/85‑115 (MQ=255)                                      ggtaagatgcccgaccaccgccgcatgccgagatccctgaatgcccgcagctcttccccagcttgaccgtgccgtcgtcggccaGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGcc                                                                                                                                                 <  1:1345753‑M1/31‑1 (MQ=255)                                      ccGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCgg                                                                                                              <  1:587413/150‑1 (MQ=255)                                      ccGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCgg                                                                                                              <  2:507450/150‑1 (MQ=255)                                         acacCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCa                                                                                                           >  2:1549328/1‑150 (MQ=255)                                         acacCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACAGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCa                                                                                                           <  2:1102602/150‑1 (MQ=255)                                              tgtgCCAGTTCCATCTTCGACAACGTGGACAGCGGCACACCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAg                                                                                                      <  2:1208667/150‑1 (MQ=255)                                              gcccgaccaccgccgcatgccgagatccctgaatgcccgcagctcttccccagcttgaccgtgccgtcgtcggccaGCGCCTTGCGCACCTGGCGCAG‑GCGCTgg                                                                                                                                                   >  2:1239997‑M1/77‑105 (MQ=255)                                              gcccgaccaccgccgcatgccgagatccctgaatgcccgcagctcttccccagcttgaccgtgccgtcgtcggccaGCGCCTTGCGCACCTGGCGCAG‑GCGCTgg                                                                                                                                                   <  1:1239997‑M1/29‑1 (MQ=255)                                                 gCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGa                                                                                                   <  2:1589431/150‑1 (MQ=255)                                                      ttCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTggg                                                                                                                          <  1:1256468/122‑1 (MQ=255)                                                      ttCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTggg                                                                                                                          >  2:1256468/1‑122 (MQ=255)                                                           tCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTg                                                                                                                                                    >  2:1045425/1‑91 (MQ=255)                                                           tCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTg                                                                                                                                                    <  1:1045425/91‑1 (MQ=255)                                                           tCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTgg                                                                                                                           <  2:1552942/116‑1 (MQ=255)                                                           tCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTgg                                                                                                                           >  1:1552942/1‑116 (MQ=255)                                                            cTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATgc                                                                                        >  2:138944/1‑150 (MQ=255)                                                             ttCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATgcg                                                                                       >  2:281987/1‑150 (MQ=255)                                                               cGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATgcggc                                                                                     <  1:870455/150‑1 (MQ=255)                                                                 aCAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGacgacg                                                                                                                                          <  1:328861/95‑1 (MQ=255)                                                                 aCAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGacgacg                                                                                                                                          >  2:328861/1‑95 (MQ=255)                                                                 aCAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAg                                                                                                      >  2:629646/1‑131 (MQ=255)                                                                 aCAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAg                                                                                                      <  1:629646/131‑1 (MQ=255)                                                                        ggACAGCGGCACGCCACCGGATTCGGAGAATTTCCTGAGGGTCATCTGGCGAGCCTTGGCCACCTGGAGCAG‑GCGCTGGCCGACGACGGTACCGTCAAGGTGGGGAAGAGCTGCGGTCATCCAGGGATCTCGGCATGCGGCGGTGGTCgg                                                                            <  2:652014/150‑1 (MQ=255)                                                                            aGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCAt                                                                        >  1:6485/1‑150 (MQ=255)                                                                             gCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCCGCGGGCATTCCGGCAGCGTTGCATGCGGCGGTGGTCGGGCATc                                                                       <  1:862666/150‑1 (MQ=255)                                                                              cGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCgg                                                                                             <  2:551850/127‑1 (MQ=255)                                                                              cGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCgg                                                                                             >  1:551850/1‑127 (MQ=255)                                                                                gCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAgg                                                                                                     <  1:1342862/117‑1 (MQ=255)                                                                                gCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAgg                                                                                                     >  2:1342862/1‑117 (MQ=255)                                                                                gCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGc                                                                          >  2:122046/1‑144 (MQ=255)                                                                                gCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGc                                                                          <  1:122046/144‑1 (MQ=255)                                                                                 cACGCCAGTGGCTTCGGACAATTGCTTGAGCGTCATCTTGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTAc                                                                   <  2:1502226/150‑1 (MQ=255)                                                                                 cACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTAc                                                                   >  1:1138643/1‑150 (MQ=255)                                                                                   cGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCt                                                                 >  2:44818/1‑150 (MQ=255)                                                                                    gCCACTGGCTTCGGACAATTGCTTTAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGACCGACTACGGCGCGGTCGAGCAGGGGTAGGGCAGCGGGCATTCAGGGTTCTCGGTATACGGCGTTGGTCGGGCATCTTACCtt                                                                >  1:1502968/1‑150 (MQ=255)                                                                                    gCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCtt                                                                <  2:1138643/150‑1 (MQ=255)                                                                                      cACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTgg                                                              >  2:1157945/1‑150 (MQ=255)                                                                                        cTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGAc                                                            >  1:1431735/1‑150 (MQ=255)                                                                                            cTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCtt                                                        <  1:138944/150‑1 (MQ=255)                                                                                            cTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCCCTGG‑AGTGTGCTTTTCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCtt                                                        <  2:1276725/150‑1 (MQ=255)                                                                                             ttCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCggg                                                                                                             >  2:83822/1‑96 (MQ=255)                                                                                             ttCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCggg                                                                                                             <  1:83822/96‑1 (MQ=255)                                                                                             ttCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGAGCCtgg                                                       >  2:52839/1‑148 (MQ=255)                                                                                                  aCAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCAt                                                  <  1:1549328/150‑1 (MQ=255)                                                                                                     aTTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGc                                                                                                                >  1:1404266/1‑85 (MQ=255)                                                                                                     aTTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGc                                                                                                                <  2:1404266/85‑1 (MQ=255)                                                                                                          ttGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAag                                                                                                                      <  2:1321719/74‑1 (MQ=255)                                                                                                          ttGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAag                                                                                                                      >  1:1321719/1‑74 (MQ=255)                                                                                                               ggTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCa                                     >  1:695823/1‑150 (MQ=255)                                                                                                                 tCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCata                                   >  2:1622057/1‑150 (MQ=255)                                                                                                                      ggccagcgcctgcgccaggtgcgcaaggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTAcc                                                                  <  1:1345753‑M2/84‑1 (MQ=255)                                                                                                                      ggccagcgcctgcgccaggtgcgcaaggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTAcc                                                                  >  2:1345753‑M2/32‑115 (MQ=255)                                                                                                                        gcgcgcCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCt                                                                                                                             <  2:314939/53‑1 (MQ=255)                                                                                                                        gcgcgcCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCt                                                                                                                             >  1:314939/1‑53 (MQ=255)                                                                                                                        gcgcgcCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATg                                                                                         <  2:1242535/89‑1 (MQ=255)                                                                                                                        gcgcgcCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATg                                                                                         >  1:1242535/1‑89 (MQ=255)                                                                                                                        ccagcgcctgcgccaggtgcgcaaggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGc                                                                          >  2:1239997‑M2/30‑105 (MQ=255)                                                                                                                        ccagcgcctgcgccaggtgcgcaaggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGc                                                                          <  1:1239997‑M2/76‑1 (MQ=255)                                                                                                                            GCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGAGGACGGCACGGCCAAGCATGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCTGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATtc                        <  1:730946‑M1/150‑1 (MQ=255)                                                                                                                            GCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTAcc                                                                  <  2:881574‑M1/108‑1 (MQ=255)                                                                                                                            GCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTAcc                                                                  >  1:881574‑M1/1‑108 (MQ=255)                                                                                                                            GCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATtc                        <  2:342155‑M1/150‑1 (MQ=255)                                                                                                                              CTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATtctc                      <  2:751678‑M1/150‑1 (MQ=255)                                                                                                                                tgcgccaggtgcgcaaggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCa                                                                                           <  1:936276‑M2/59‑1 (MQ=255)                                                                                                                                tgcgccaggtgcgcaaggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCa                                                                                           >  2:936276‑M2/22‑80 (MQ=255)                                                                                                                                tGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCAt                    >  1:270982/1‑150 (MQ=255)                                                                                                                                tGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATGCTGATGTATTAGCATtctcgt                    <  2:1298001/150‑3 (MQ=255)                                                                                                                                    cACCTGGCGCAG‑GCGCTGGCCGACGTCTCCACGTTCAAGCTGGGGAAGCGCTGCGGGCATTTAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAAt                <  2:730946/150‑1 (MQ=255)                                                                                                                                    cACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAAt                <  1:44818/150‑1 (MQ=255)                                                                                                                                       cTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATgc                                                                                        <  2:492734/75‑1 (MQ=255)                                                                                                                                       cTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATgc                                                                                        >  1:492734/1‑75 (MQ=255)                                                                                                                                       cTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCg                                                                             <  2:219423/86‑1 (MQ=255)                                                                                                                                       cTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCg                                                                             >  1:219423/1‑86 (MQ=255)                                                                                                                                       cTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGAt             >  2:464107/1‑150 (MQ=255)                                                                                                                                         ggCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATaa           <  1:751678/150‑1 (MQ=255)                                                                                                                                         ggCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATaa           <  2:6485/150‑1 (MQ=255)                                                                                                                                               aggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGcc      >  2:989262‑M2/7‑150 (MQ=255)                                                                                                                                                ggcgcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCCt     <  1:1622057‑M2/145‑1 (MQ=255)                                                                                                                                                   gcTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCCTGGc  >  1:662637‑M2/3‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AGCGCCCGCGCAGCAGCGGCCAGTTTTTCATAGCTGACCGACACCTGTGCCAGTTCCATCTTCGACAACGTGGACAGCGGCACGCCACTGGCTTCGGACAATTGCTTGAGGGTCATCTGGCGCGCCTTGCGCACCTGGCGCAG‑GCGCTGGCCGACGACGGCACGGTCAAGCTGGGGAAGAGCTGCGGGCATTCAGGGATCTCGGCATGCGGCGGTGGTCGGGCATCTTACCTTGGACCCTTGCGCATTTCTAAATTCTCATATATTAGAATTCTCATAAATGATAATTGCCTGGC  >  NC_002947/2562001‑2562295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.