| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6155257 = | 15 (0.250) | 7 (0.120) | 7/234 | NT | 22.7% | intergenic (‑11/+195) | PP_5398/PP_5399 | transposase/hypothetical protein |
| ? | NC_002947 | 6155313 = | 33 (0.570) | intergenic (‑67/+139) | PP_5398/PP_5399 | transposase/hypothetical protein | |||||
GCACCTGATTTCCCTGCGTCCAGAAAGTACAACTCTGCTCCCGTCTCGAACGCATACAGCGAGTAAGCGTCCGGGGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6155408‑6155257‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACGGC > NC_002947/6155313‑6155460 GCACCTGATTTCCCTGCGTCCAGAAAGTACAACTCTGCTCCCGTCTCGAACGCATACAGCGAGTAAGCGTCCGGGGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATT < 2:567382/150‑1 CTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATT > 1:1079424/1‑72 CTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATT < 2:1079424/72‑1 CTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATTGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGATGCAGGGAAAT > 1:1216602/1‑150 TCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATTGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGATGCAGGGAAATC < 2:1216602/150‑1 TCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATTGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATC > 1:994242/1‑150 GGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATTGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGG < 1:522696/133‑1 GGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATTGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGG > 2:522696/1‑133 GATCACCCTTATTGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCT < 2:994242/150‑1 ATCACCCTTACTGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTG > 2:1471071/1‑150 TGCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACGc < 1:1471071/150‑2 GCTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACGGC < 1:1031057/150‑1 GCACCTGATTTCCCTGCGTCCAGAAAGTACAACTCTGCTCCCGTCTCGAACGCATACAGCGAGTAAGCGTCCGGGGAACTCACCTTCCGAACTCCAGCATTAAGGGCGATGGTGTCCGCGTATTTTTAAGCGGACGCGATCACCCTTATTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6155408‑6155257‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcTGGAGTTCGGAAGGTGAGTTCCCCGGACGCTTACTCGCTGTATGCGTTCGAGACGGGAGCAGAGTTGTACTTTCTGGACGCAGGGAAATCAGGTGCGGAAGTACTGCAGAATTTCCTCAAAGTTTCCAAGCTGCTGCATTCAGACGGC > NC_002947/6155313‑6155460 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |