| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6169258 = | 69 (1.150) | 6 (0.110) | 6/226 | NT | 8.3% | coding (1093/1182 nt) | PP_5408 | hypothetical protein |
| ? | NC_002947 | 6169283 = | 68 (1.210) | coding (1068/1182 nt) | PP_5408 | hypothetical protein | |||||
GTCACTCCGCGATTTTGACCACTACAAAGCACACTCACTCCGAGACCGCCGACCAAGACTCTATCGTTGCTGCAACGTAGCTGATTCAAGACGCGACTTGCGTTTCAGTCCCAGACTGGTAAAAGCATCACTCCCAG‑CG‑GTTCCTCGACTGGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6169412‑6169258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggagTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCATGG > NC_002947/6169283‑6169430 GTCACTCCGCGATTTTGACCACTACAAAGCACACTCACTCCGAGACCGCCGACCAAGACTCTATCGTTGCTGCAACGTAGCTGATTCAAGACGCGACTTGCGTTTCAGTCCCAGACTGGTAAAAGCATCACTCCCAG‑CG‑GTTCCTCGACT < 1:332357/150‑1 CACTCCGCGATTTTGACCACTACAAAGCACACTCACTCCGAGACCGCCGACCAAGACTCTATCGTTGCTGCAACGTAGCTGATTCAAGACGCGACTTGCGTTTCAGTCCCAGACTGGTAAAAGCATCACTCCCAG‑CG‑GTTCCTCGACTGG < 1:985319/150‑1 TCCGCGCTTTTGTCCACTACATGGCACACTCACGCCGAGACCGCCGACCAAGACTCTATCGTTGCTGCAACGTAGCTGATTCAAGACGCGACTTGCGTTTCAGTCCCAGACTGGTAAAAGCATCACTCCCAG‑CG‑GTTCCTCGACTGGGAG > 2:1335545/1‑150 TCCGCGATTTTGACCACTACAAAGCACACTCACTCCGAGACCGCCGACCAAGACTCTATCGTTGCTGCAACGTAGCTGATTCAAGACGCGACTTGCGTTTCAGTCCCAGACTGGTAAAAGCATCACTCCCAG‑CG‑GTTCCTCGACTGGGAG > 2:719665/1‑150 AAAGCACACTCACTCCGAGACCGCCGACCAAGACTCTATCGTTGCTGCAACGTAGCTGATTCAAGACGCGACTTGCGTTTCAGTCCCAGACTGGTAAAAGCATCACTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGG < 1:1558633/150‑1 GACTTGCGTTTCAGTCCCAGACTGGTAAAAGCATCACTCCCAG‑TC‑GAGGCACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTC > 1:485509/1‑150 TGGTAAAAGCATCACTCCCAG‑CG‑GTTCCTCGACTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTG < 2:1558633/150‑1 ATCACTCCCAG‑CG‑GTTCCTCGACTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGC > 1:1317547/1‑112 ATCACTCCCAG‑CG‑GTTCCTCGACTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGC < 2:1317547/112‑1 TCACTCCCAG‑CG‑GTTCCTCGACTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCCCACGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGC > 1:835523/1‑150 GGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCAT < 1:1565987/150‑1 AGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCATGG < 1:52452/150‑1 AGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCATGG < 2:718574/150‑1 GTCACTCCGCGATTTTGACCACTACAAAGCACACTCACTCCGAGACCGCCGACCAAGACTCTATCGTTGCTGCAACGTAGCTGATTCAAGACGCGACTTGCGTTTCAGTCCCAGACTGGTAAAAGCATCACTCCCAG‑CG‑GTTCCTCGACTGGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6169412‑6169258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggagTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCATGG > NC_002947/6169283‑6169430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |