New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6169258 =69 (1.150)6 (0.110) 6/226 NT 8.3% coding (1093/1182 nt) PP_5408 hypothetical protein
?NC_002947 6169283 = 68 (1.210)coding (1068/1182 nt) PP_5408 hypothetical protein

TCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCATGG  >  NC_002947/6169134‑6169430
                                                                                                                                                       |                                                                                                                                                   
tCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCGGGGGGt                                                                                                                                                     >  1:944251/1‑150 (MQ=255)
  gcgattttgaccactacaaagcacactcactccgagacgtgggaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGTCGAGGAACCGCTGGGAGTGa                                                                                                                                                   >  1:835523‑M1/123‑150 (MQ=255)
   gCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACATGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGAt                                                                                                                                                  >  1:373515/1‑150 (MQ=255)
        cACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCttt                                                                                                                                             >  2:29860/1‑150 (MQ=255)
          cgcgACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCttttt                                                                                                                                           <  2:1127565/150‑2 (MQ=255)
           gcgACCGCGAGGGTAAGGCTTACCTTACTGCAACAGGCGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTAc                                                                                                                                          <  1:8106/150‑1 (MQ=255)
             cactacaaagcacactcactccgagaccgccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCa                                                                                                                                        <  2:1558633‑M1/39‑1 (MQ=255)
                 gcgAGGGTAAGGCTTACCTTACTGCAACTGACGTGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCt                                                                                                                                    >  1:1219259/1‑150 (MQ=255)
                  cgAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTg                                                                                                                                   <  2:797361/150‑1 (MQ=255)
                     aaagcacactcactccgagaccgccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcactcccagtcgaggaaccgctgggagTGATGCTTTTACCAGTCTgg                                                                                                                                  <  1:1558633‑M2/20‑1 (MQ=255)
                            gCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAAc                                                                                                                         >  1:1574405/1‑150 (MQ=255)
                                accttacTGCAACTGACGTGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCaa                                                                                                                     <  2:1219259/150‑1 (MQ=255)
                                accttacTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCaa                                                                                                                     <  2:1484053/150‑1 (MQ=255)
                                  cttacTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGt                                                                                                                   >  2:49028/1‑150 (MQ=255)
                                   gagaccgccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGCGGTGCCTCGACTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTc                                                                                                                  >  1:485509‑M1/90‑150 (MQ=255)
                                         gccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGTCGAGGAACCGCTGGGAGTGAt                                                                                                                                                  <  2:1317547‑M1/29‑1 (MQ=255)
                                         gccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGTCGAGGAACCGCTGGGAGTGAt                                                                                                                                                  >  1:1317547‑M1/84‑112 (MQ=255)
                                          aaCTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCtt                                                                                                           <  1:49028/150‑1 (MQ=255)
                                          aaCTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCt                                                                                                            <  2:383738/149‑1 (MQ=255)
                                          aaCTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCt                                                                                                            >  1:383738/1‑149 (MQ=255)
                                                 gcgcACGGGTGGCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAg                                                                                                    <  2:373515/150‑1 (MQ=255)
                                                 gcgcACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAg                                                                                                    >  1:719665/1‑150 (MQ=255)
                                                          tgtCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgc                                                                                           >  2:1345003/1‑150 (MQ=255)
                                                           gtCATCGATAGATGACCGGTTCCCCAGCAGGGGTCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgct                                                                                          <  2:1477367/150‑2 (MQ=255)
                                                           gtCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgct                                                                                          <  2:1477331/150‑2 (MQ=255)
                                                              aTCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgcagca                                                                                       >  1:123708/1‑150 (MQ=255)
                                                                  aTAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGa                                                                                   <  1:396248/150‑1 (MQ=255)
                                                                  aTAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGa                                                                                   >  2:1565987/1‑150 (MQ=255)
                                                                     gATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATag                                                                                >  1:1224174/1‑150 (MQ=255)
                                                                      aTGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGaaa                                                                                                                          <  1:789483/107‑1 (MQ=255)
                                                                      aTGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGaaa                                                                                                                          >  2:789483/1‑107 (MQ=255)
                                                                      aTGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATaga                                                                               <  1:1345003/150‑1 (MQ=255)
                                                                      aTGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATaga                                                                               >  1:577825/1‑150 (MQ=255)
                                                                       tGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTAc                                                                                                                                          <  1:222576/90‑1 (MQ=255)
                                                                       tGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTAc                                                                                                                                          >  2:222576/1‑90 (MQ=255)
                                                                        gACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGt                                                                                                              <  1:1640669/117‑1 (MQ=255)
                                                                        gACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGt                                                                                                              >  2:1640669/1‑117 (MQ=255)
                                                                            ggTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAATCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTg                                                                         <  1:86593/150‑1 (MQ=255)
                                                                            ggTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTg                                                                         <  2:123708/150‑1 (MQ=255)
                                                                             gTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTgg                                                                        >  2:772998/1‑150 (MQ=255)
                                                                             gTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTg                                                                         >  1:711491/1‑149 (MQ=255)
                                                                             gTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTg                                                                         <  2:711491/149‑1 (MQ=255)
                                                                                       agGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAAAGCTCTAGATAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGtct                                                              >  1:1335545/1‑150 (MQ=255)
                                                                                          gacttgcgtttcagtcccagactggtaaaagcatcactcccagtcgaggcaccgctgggagTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGtctc                                                             >  1:485509‑M2/62‑150 (MQ=255)
                                                                                          gATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCgg                                                           >  1:718574/1‑150 (MQ=255)
                                                                                            tCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGgag                                                         >  2:1153421/1‑150 (MQ=255)
                                                                                                cTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGgagtgag                                                     >  2:636009/1‑150 (MQ=255)
                                                                                                 tCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTg                                                                                                                                   <  2:294436/71‑1 (MQ=255)
                                                                                                 tCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTg                                                                                                                                   >  1:294436/1‑71 (MQ=255)
                                                                                                 tCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCtt                                                                                                           <  2:1576594/95‑1 (MQ=255)
                                                                                                 tCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCtt                                                                                                           >  1:1576594/1‑95 (MQ=255)
                                                                                                      gtgACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGc                                                <  2:1367783/149‑1 (MQ=255)
                                                                                                      gtgACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGc                                                >  1:1367783/1‑149 (MQ=255)
                                                                                                        ccagactggtaaaagcatcaCTCCCAGCGGTTCCTCGACTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCttt                                             <  1:1558633‑M1/130‑1 (MQ=255)
                                                                                                           tGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgcag                                                                                         <  2:852636/103‑1 (MQ=255)
                                                                                                           tGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgcag                                                                                         >  1:852636/1‑103 (MQ=255)
                                                                                                           tGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTa                                          >  1:378367/1‑150 (MQ=255)
                                                                                                           tGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTa                                          >  2:52452/1‑150 (MQ=255)
                                                                                                            ggCGCCCAACCCGTGGCTCCCAGTCGAGGAACCGATGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCTCGTCTTGAATCAGCTACGTTGCTGCAACGATAGAGTCTTGTTCGGCGGTCTCGGAGTGAGAATGCTTTGTAg                                         <  2:406152/150‑1 (MQ=255)
                                                                                                              cgcCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTg                                       <  2:1224174/150‑1 (MQ=255)
                                                                                                              cgcCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTg                                       <  2:577825/150‑1 (MQ=255)
                                                                                                               gcCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTgg                                      >  1:620179/1‑150 (MQ=255)
                                                                                                                tggtaaaagcatcactcccagcggttcctcgactgggagTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTg                                       <  2:1558633‑M2/111‑1 (MQ=255)
                                                                                                                cgcAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGt                                     <  2:451045/148‑1 (MQ=255)
                                                                                                                    aCCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACt                                                                                                                              >  2:101075/1‑57 (MQ=255)
                                                                                                                    aCCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACt                                                                                                                              <  1:101075/57‑1 (MQ=255)
                                                                                                                     ccAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTg                                                                                            >  1:1455553/1‑90 (MQ=255)
                                                                                                                     ccAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTg                                                                                            <  2:1455553/90‑1 (MQ=255)
                                                                                                                     ccAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCaaaa                                >  2:1534919/1‑150 (MQ=255)
                                                                                                                         tGGCTCCCAGTCGACGAACCGCGGGGAGTTATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATcgc                            <  2:378367/150‑1 (MQ=255)
                                                                                                                          atcactcccagcggttcctcgactgggagTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTcggc                                                                   >  1:1317547‑M2/30‑112 (MQ=255)
                                                                                                                          atcactcccagcggttcctcgactgggagTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTcggc                                                                   <  2:1317547‑M2/83‑1 (MQ=255)
                                                                                                                           tcactcccagcggttcctcgactgggagTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCCCACGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATcgc                            >  1:835523‑M2/29‑150 (MQ=255)
                                                                                                                            CTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGCGTGAGTGTGCCATGTAGTGGACAAAAGCGCGGa                         >  2:1335545‑M1/1‑150 (MQ=255)
                                                                                                                            CTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGa                         >  2:719665‑M1/1‑150 (MQ=255)
                                                                                                                               CCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTg                      <  1:985319‑M1/150‑1 (MQ=255)
                                                                                                                                 AGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGAc                    <  1:332357‑M1/150‑1 (MQ=255)
                                                                                                                                    cGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGCGACTGAAACGCAAGTCGCGTCTTGAAGCAGCTACGTTGATACACACATAGAGTCTTGGTTCCTGATCGTTGAGTTAGTTTTGTTTGTAGTGGTCAAAATCGCGGAGTGACCAt                 <  1:29860/150‑1 (MQ=255)
                                                                                                                                     gAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGgagtga                                                      <  1:1280743/112‑1 (MQ=255)
                                                                                                                                     gAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGgagtga                                                      >  2:1280743/1‑112 (MQ=255)
                                                                                                                                     gAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTAGCGGCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATa                >  1:530423/1‑150 (MQ=255)
                                                                                                                                      aGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCgg                          <  1:1050025/139‑1 (MQ=255)
                                                                                                                                      aGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCgg                          >  2:1050025/1‑139 (MQ=255)
                                                                                                                                       ggAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAg              <  2:1574405/150‑1 (MQ=255)
                                                                                                                                       ggAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAg              <  1:636009/150‑1 (MQ=255)
                                                                                                                                       ggAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAg              <  2:332357/150‑1 (MQ=255)
                                                                                                                                           ccGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGa                         <  1:1401496/135‑1 (MQ=255)
                                                                                                                                           ccGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGa                         >  2:1401496/1‑135 (MQ=255)
                                                                                                                                                   ggagTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCAt    <  1:1565987‑M2/146‑1 (MQ=255)
                                                                                                                                                     agTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCATgg  <  1:52452‑M2/148‑1 (MQ=255)
                                                                                                                                                     agTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCATgg  <  2:718574‑M2/148‑1 (MQ=255)
                                                                                                                                                       tGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCtt                                              >  2:1318184/1‑104 (MQ=255)
                                                                                                                                                       tGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCtt                                              <  1:1318184/104‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                   
TCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAACCGCTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGAGTGACCATAAGGCAACTCCATGG  >  NC_002947/6169134‑6169430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.