New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6169258 =	69 (1.150)	6 (0.110)	6/226	NT	8.3%	coding (1093/1182 nt)	PP_5408	hypothetical protein
	?	NC_002947	6169283 =	68 (1.210)					coding (1068/1182 nt)	PP_5408	hypothetical protein

CAGGTCAGTTGTAAACATAGCGCCTCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGA  >  NC_002947/6169110‑6169407                                                                                                                                                     |                                                                                                                                                        ccatggagttgccttatggtcactccgcgattttgaccactacaaagcacactcactccgagaccgccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCt                                                                                                                                                        <  2:718574‑M1/2‑1 (MQ=255) ccatggagttgccttatggtcactccgcgattttgaccactacaaagcacactcactccgagaccgccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCt                                                                                                                                                        <  1:52452‑M1/2‑1 (MQ=255)  aGGTCAGTTGTAAACATAGCGCCTCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTc                                                                                                                                                       <  2:707371/150‑1 (MQ=255)   atggagttgccttatggtcactccgcgattttgaccactacaaagcacactcactccgagaccgccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTcc                                                                                                                                                      <  1:1565987‑M1/4‑1 (MQ=255)         ttGTAAACATAGCGCCTCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCg                                                                                                                                                >  2:396248/1‑150 (MQ=255)            tAAACATAGCGCCTCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTc                                                                                                                                                       >  1:1150297/1‑140 (MQ=255)            tAAACATAGCGCCTCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTc                                                                                                                                                       <  2:1150297/140‑1 (MQ=255)                     cgcCTCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTgg                                                                                                                                  <  1:889589/150‑1 (MQ=255)                      gcCTCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTggg                                                                                                                                 >  1:797361/1‑150 (MQ=255)                         tCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CGGGGGGt                                                                                                                              >  1:944251/1‑150 (MQ=255)                           gcgattttgaccactacaaagcacactcactccgagacgtgggaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGa                                                                                                                            >  1:835523‑M1/123‑150 (MQ=255)                           cGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTc                                                                                                                                                 <  2:305508/131‑1 (MQ=255)                           cGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTc                                                                                                                                                 >  1:305508/1‑131 (MQ=255)                            gCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACATGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGAt                                                                                                                           >  1:373515/1‑150 (MQ=255)                                 cACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCttt                                                                                                                      >  2:29860/1‑150 (MQ=255)                                   cgcgACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCttttt                                                                                                                    <  2:1127565/150‑2 (MQ=255)                                    gcgACCGCGAGGGTAAGGCTTACCTTACTGCAACAGGCGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTAc                                                                                                                   <  1:8106/150‑1 (MQ=255)                                      cactacaaagcacactcactccgagaccgccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCa                                                                                                                 <  2:1558633‑M1/39‑1 (MQ=255)                                          gcgAGGGTAAGGCTTACCTTACTGCAACTGACGTGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCt                                                                                                             >  1:1219259/1‑150 (MQ=255)                                           cgAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTg                                                                                                            <  2:797361/150‑1 (MQ=255)                                                 tAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAg                                                                                                                                              <  2:775588/112‑1 (MQ=255)                                                 tAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAg                                                                                                                                              >  1:775588/1‑112 (MQ=255)                                                     gCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAAc                                                                                                  >  1:1574405/1‑150 (MQ=255)                                                         accttacTGCAACTGACGTGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCaa                                                                                              <  2:1219259/150‑1 (MQ=255)                                                         accttacTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCaa                                                                                              <  2:1484053/150‑1 (MQ=255)                                                           cttacTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGt                                                                                            >  2:49028/1‑150 (MQ=255)                                                            gagaccgccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGCGGTGCCTC‑GA‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTc                                                                                           >  1:485509‑M1/90‑150 (MQ=255)                                                                  gccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGAt                                                                                                                           >  1:1317547‑M1/84‑112 (MQ=255)                                                                  gccgaccaagactctatcgttgctgcaacgtagctgattcaagacgcgacttgcgtttcagtcccagactggtaaaagcatcaCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGAt                                                                                                                           <  2:1317547‑M1/29‑1 (MQ=255)                                                                   aaCTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCtt                                                                                    <  1:49028/150‑1 (MQ=255)                                                                   aaCTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCt                                                                                     <  2:383738/149‑1 (MQ=255)                                                                   aaCTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCt                                                                                     >  1:383738/1‑149 (MQ=255)                                                                          gcgcACGGGTGGCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAg                                                                             <  2:373515/150‑1 (MQ=255)                                                                          gcgcACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGa                                                                                                                                >  1:960203/1‑99 (MQ=255)                                                                          gcgcACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGa                                                                                                                                <  2:960203/99‑1 (MQ=255)                                                                          gcgcACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAg                                                                             >  1:719665/1‑150 (MQ=255)                                                                                   tgtCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgc                                                                    >  2:1345003/1‑150 (MQ=255)                                                                                    gtCATCGATAGATGACCGGTTCCCCAGCAGGGGTCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgct                                                                   <  2:1477367/150‑2 (MQ=255)                                                                                    gtCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgct                                                                   <  2:1477331/150‑2 (MQ=255)                                                                                       aTCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgcagca                                                                >  1:123708/1‑150 (MQ=255)                                                                                           aTAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGa                                                            <  1:396248/150‑1 (MQ=255)                                                                                           aTAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGa                                                            >  2:1565987/1‑150 (MQ=255)                                                                                              gATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATag                                                         >  1:1224174/1‑150 (MQ=255)                                                                                               aTGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGaaa                                                                                                   <  1:789483/107‑1 (MQ=255)                                                                                               aTGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGaaa                                                                                                   >  2:789483/1‑107 (MQ=255)                                                                                               aTGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATaga                                                        <  1:1345003/150‑1 (MQ=255)                                                                                               aTGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATaga                                                        >  1:577825/1‑150 (MQ=255)                                                                                                tGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTAc                                                                                                                   <  1:222576/90‑1 (MQ=255)                                                                                                tGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTAc                                                                                                                   >  2:222576/1‑90 (MQ=255)                                                                                                 gACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGt                                                                                       <  1:1640669/117‑1 (MQ=255)                                                                                                 gACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGt                                                                                       >  2:1640669/1‑117 (MQ=255)                                                                                                     ggTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAATCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTg                                                  <  1:86593/150‑1 (MQ=255)                                                                                                     ggTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTg                                                  <  2:123708/150‑1 (MQ=255)                                                                                                      gTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTgg                                                 >  2:772998/1‑150 (MQ=255)                                                                                                      gTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTg                                                  <  2:711491/149‑1 (MQ=255)                                                                                                      gTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTg                                                  >  1:711491/1‑149 (MQ=255)                                                                                                                agGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAAAGCTCTAGATAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGtct                                       >  1:1335545/1‑150 (MQ=255)                                                                                                                   gATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCgg                                    >  1:718574/1‑150 (MQ=255)                                                                                                                     tCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGgag                                  >  2:1153421/1‑150 (MQ=255)                                                                                                                         cTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGgagtgag                              >  2:636009/1‑150 (MQ=255)                                                                                                                          tCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTg                                                                                                            >  1:294436/1‑71 (MQ=255)                                                                                                                          tCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTg                                                                                                            <  2:294436/71‑1 (MQ=255)                                                                                                                          tCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCtt                                                                                    >  1:1576594/1‑95 (MQ=255)                                                                                                                          tCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCtt                                                                                    <  2:1576594/95‑1 (MQ=255)                                                                                                                               gtgACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGc                         >  1:1367783/1‑149 (MQ=255)                                                                                                                               gtgACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGc                         <  2:1367783/149‑1 (MQ=255)                                                                                                                                 ccagactggtaaaagcatcaCTCCCAG‑CG‑GTTCCTCGACTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCttt                      <  1:1558633‑M1/130‑1 (MQ=255)                                                                                                                                    tGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgcag                                                                  <  2:852636/103‑1 (MQ=255)                                                                                                                                    tGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTgcag                                                                  >  1:852636/1‑103 (MQ=255)                                                                                                                                    tGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTa                   >  2:52452/1‑150 (MQ=255)                                                                                                                                    tGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTa                   >  1:378367/1‑150 (MQ=255)                                                                                                                                     ggCGCCCAACCCGTGGCTCCCAGTCGAGGAAC‑CG‑ATGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCTCGTCTTGAATCAGCTACGTTGCTGCAACGATAGAGTCTTGTTCGGCGGTCTCGGAGTGAGAATGCTTTGTAg                  <  2:406152/150‑1 (MQ=255)                                                                                                                                       cgcCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTg                <  2:577825/150‑1 (MQ=255)                                                                                                                                       cgcCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTg                <  2:1224174/150‑1 (MQ=255)                                                                                                                                        gcCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTgg               >  1:620179/1‑150 (MQ=255)                                                                                                                                         cgcAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGt              <  2:451045/148‑1 (MQ=255)                                                                                                                                             aCCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACt                                                                                                       >  2:101075/1‑57 (MQ=255)                                                                                                                                             aCCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACt                                                                                                       <  1:101075/57‑1 (MQ=255)                                                                                                                                              ccAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTg                                                                     >  1:1455553/1‑90 (MQ=255)                                                                                                                                              ccAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTg                                                                     <  2:1455553/90‑1 (MQ=255)                                                                                                                                              ccAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCaaaa         >  2:1534919/1‑150 (MQ=255)                                                                                                                                                  tGGCTCCCAGTCGACGAAC‑CG‑CGGGGAGTTATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATcgc     <  2:378367/150‑1 (MQ=255)                                                                                                                                                     CTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGCGTGAGTGTGCCATGTAGTGGACAAAAGCGCGGa  >  2:1335545‑M1/1‑150 (MQ=255)                                                                                                                                                     CTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGa  >  2:719665‑M1/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                        CAGGTCAGTTGTAAACATAGCGCCTCCGCTACCACGCGACCGCGAGGGTAAGGCTTACCTTACTGCAACTGACGCGCACAGGTGTCATCGATAGATGACCGGTTCCCCAGCAGGGATCTGCTCGTGGTGACTGGCGCCCAACCAGTGGCTCCCAGTCGAGGAAC‑CG‑CTGGGAGTGATGCTTTTACCAGTCTGGGACTGAAACGCAAGTCGCGTCTTGAATCAGCTACGTTGCAGCAACGATAGAGTCTTGGTCGGCGGTCTCGGAGTGAGTGTGCTTTGTAGTGGTCAAAATCGCGGA  >  NC_002947/6169110‑6169407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.