New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1622527 =	53 (0.890)	16 (0.310)	13/204	NT	28.6%	intergenic (+7/+59)	PP_1421/PP_1422	sensor histidine kinase TctE/hypothetical protein
	?	NC_002947	1622577 =	35 (0.690)					intergenic (+57/+9)	PP_1421/PP_1422	sensor histidine kinase TctE/hypothetical protein

GTTCTACCGGCGAAGTGCGCAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGG  >  NC_002947/1622379‑1622669                                                                                                                                                     |                                                                                                                                                gcagatcgcccgctgcatcagtcagcgcgggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGc                                                                                                                                                >  1:1473261‑M1/149‑150 (MQ=255)  ttCTACCGGCGAAGTGCGCAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGcc                                                                                                                                               >  2:1367721/1‑150 (MQ=255)   agatcgcccgctgcatcagtcagcgcgggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCt                                                                                                                                              >  1:1449725‑M1/147‑150 (MQ=255)     tACCGGCGAAGTGCGCAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCtgt                                                                                                                                            >  1:1252732/1‑150 (MQ=255)      tcgcccgctgcatcagtcagcgcgggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgccgagctgtaccaGCCtgtg                                                                                                                                           >  1:213500‑M1/144‑150 (MQ=255)         ggCGAAGTGCGCAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCtgt                                                                                                                                            <  1:1064333/146‑1 (MQ=255)         ggCGAAGTGCGCAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCtgt                                                                                                                                            >  2:1064333/1‑146 (MQ=255)         ggCGAAGTGCGCAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCg                                                                                                                                        >  1:869660/1‑150 (MQ=255)          gCGAAGTGCGCAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGc                                                                                                                                       <  1:396321/150‑1 (MQ=255)          ccgctgcatcagtcagcgcgggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGc                                                                                                                                       <  2:1628373‑M1/11‑1 (MQ=255)            gctgcatcagtcagcgcgggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGccc                                                                                                                                     >  1:980137‑M1/138‑150 (MQ=255)               gcatcagtcagcgcgggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCtt                                                                                                                                  >  2:94083‑M1/135‑150 (MQ=255)                catcagtcagcgcgggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCttt                                                                                                                                 >  2:715921‑M1/134‑150 (MQ=255)                   gcAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCAt                                                                                                                              >  1:1212242/1‑150 (MQ=255)                   gcAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCAt                                                                                                                              <  1:203900/150‑1 (MQ=255)                     gtcagcgcgggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtctatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATgg                                                                                                                            <  2:1368441‑M1/22‑1 (MQ=255)                       ggCGGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGc                                                                                                                          <  2:191928/150‑1 (MQ=255)                             gggcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtctatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCAccc                                                                                                                    >  1:1368441‑M1/121‑150 (MQ=255)                               gcgtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCcgc                                                                                                                  >  2:1119139‑M1/119‑150 (MQ=255)                                ttAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCcgcg                                                                                                                 >  2:146263/1‑150 (MQ=255)                                 gtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGc                                                                                                                                       <  2:403756‑M1/11‑1 (MQ=255)                                 gtcaccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGc                                                                                                                                       >  1:403756‑M1/117‑127 (MQ=255)                                     ccggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAgg                                                                                                            >  1:92070‑M1/113‑150 (MQ=255)                                       tGGCGATCGTTGGCGACATCTGTCGGGCGCACCTGGCGCAAGTGACGCTGCACGATGGCGAGAAGGGCGCGTTGCGGGTGCGGGGGAGCTTTATCCCGGATTGATGGGTTGCATGTGTCGCGCCTTTGATGGGCTCACTCGCGAAAgggg                                                                                                          <  2:24223/150‑1 (MQ=255)                                       ggccattggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAgggg                                                                                                          >  1:65200‑M1/111‑150 (MQ=255)                                          cGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGa                                                                                                       <  2:869660/150‑1 (MQ=255)                                           gATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGcc                                                                                                                                      >  2:786868/1‑118 (MQ=255)                                           gATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGcc                                                                                                                                      <  1:786868/118‑1 (MQ=255)                                           gATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGac                                                                                                      >  2:250835/1‑150 (MQ=255)                                            ttggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAgggg                                                                                                          >  2:1083059‑M1/106‑145 (MQ=255)                                            ttggctgcgctgccggcgtaccgccatctggggttgccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAgggg                                                                                                          <  1:1083059‑M1/40‑1 (MQ=255)                                              cGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGAca‑ca                                                                                                  <  1:847373/150‑1 (MQ=255)                                               gTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCGCGGGTGAGCCCATGAAAGGGGCGACA‑CAg                                                                                                 <  1:684165/150‑1 (MQ=37)                                               gTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGCGTCAATGTCATCTTTATCGCGTATTGGGGGTTTGCCTGTGTCGCCCCTTTCGCGGGTGAGCCCATGAAAGGGGCGACA‑CAg                                                                                                 <  1:609877/150‑1 (MQ=16)                                                    cGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTCGCCTGGGTAGCCCCTTTCATGGGCTCCCCCGCGAAAGGGGCGACA‑CAGGCTgg                                                                                            <  1:376219/150‑1 (MQ=255)                                                     gagaTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATgg                                                                                                                            >  1:726536/1‑118 (MQ=255)                                                     gagaTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATgg                                                                                                                            <  2:726536/118‑1 (MQ=255)                                                     gagaTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGt                                                                                           >  1:1628373/1‑150 (MQ=255)                                                      agaTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTa                                                                                          <  2:1212242/150‑1 (MQ=255)                                                        aTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACa                                                                                        <  1:1367721/150‑1 (MQ=255)                                                         tCTGTCGGGCGCACCTGGCCCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAg                                                                                       <  1:146263/150‑1 (MQ=255)                                                            gTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTc                                                                                    >  1:717423/1‑150 (MQ=255)                                                             tCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCa                                                                                   <  2:717423/150‑1 (MQ=255)                                                                   gcACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCaa                                                                             >  1:151873/1‑150 (MQ=255)                                                                     aCCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATAGGCTCACCCGGAAAAGGGGCGACA‑CAGGCTTGGACAGCTCATCGCAACa                                                                           <  2:1252732/150‑1 (MQ=255)                                                                      ccTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACAt                                                                          >  2:1422366/1‑150 (MQ=255)                                                                       cTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGc                                                                                                                                                >  2:1103640/1‑80 (MQ=255)                                                                       cTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCcgc                                                                                                                  <  1:25152/110‑1 (MQ=255)                                                                       cTGGCGCAAGTGACACTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCcgc                                                                                                                  >  2:25152/1‑110 (MQ=255)                                                                       cTGCCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGc                                                                                                                                                <  1:1103640/80‑1 (MQ=255)                                                                                ccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAgggg                                                                                                          >  1:1246966‑M1/70‑109 (MQ=255)                                                                                ccgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTCTCGCCCCTTTCATGGGCTCACCCGCGAAAgggg                                                                                                          <  2:1246966‑M1/40‑1 (MQ=255)                                                                                 cgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCtgt                                                                                                                                            <  2:858142‑M1/6‑1 (MQ=255)                                                                                 cgtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCtgt                                                                                                                                            >  1:858142‑M1/69‑74 (MQ=255)                                                                                  gtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGc                                                                                                         >  1:952442‑M1/68‑108 (MQ=255)                                                                                  gtttggcaccgagctggaggtcgatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGc                                                                                                         <  2:952442‑M1/41‑1 (MQ=255)                                                                                   aCCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTcc                                                             >  1:437277/1‑150 (MQ=255)                                                                                     ccTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCcag                                                           >  2:446367/1‑150 (MQ=255)                                                                                                    gaAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGTGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTc                                            >  1:111694/1‑150 (MQ=255)                                                                                                        gatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGc                                                                                                         >  1:941926‑M1/46‑86 (MQ=255)                                                                                                        gatgaactgctggaggcgcggagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGc                                                                                                         <  2:941926‑M1/41‑1 (MQ=255)                                                                                                           gggTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCGGCGCCTCCAGCAGTTCATCGACCTCCAGCTCg                                     >  1:539237/1‑150 (MQ=255)                                                                                                           gggTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCg                                     <  1:1607397/150‑1 (MQ=255)                                                                                                             gTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCt                                                                       >  1:964275/1‑114 (MQ=255)                                                                                                             gTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTCCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCt                                                                       <  2:964275/114‑1 (MQ=255)                                                                                                                    gtgcgggtgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAAc                            >  1:1326887/1‑150 (MQ=255)                                                                                                                     tgcgggtgAGCTTTATCGCGGATTGATGGTTTGCATGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACg                           <  1:678146/150‑1 (MQ=255)                                                                                                                       cgggtgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGATCGGTGCAACACGGc                         <  2:437277/150‑1 (MQ=255)                                                                                                                            gagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAg                                                                                                             <  2:189343‑M1/37‑1 (MQ=255)                                                                                                                            gagcatgttgcgctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAg                                                                                                             >  1:189343‑M1/26‑62 (MQ=255)                                                                                                                             aGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAAcccc                   >  1:1243312/1‑150 (MQ=255)                                                                                                                               cTTTATCGCGGATTGATGGTTTGCCTGTGTCG‑CCCTTTCATTGGCTCCCCCGCGAAAAGGGCGACACCAGGC‑GGGAAAGCTCAACGCAACATGCTTCGCGCCTCCAGCAGTTTCACGACCTCCCGCTCGGGGCCCAACCGCAAACCCaaa                >  2:1625669/1‑148 (MQ=255)                                                                                                                                 ttATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGTCAACCCCAGAt               >  2:1590627/1‑150 (MQ=255)                                                                                                                                    tCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTc                                                                      <  2:314913/92‑1 (MQ=255)                                                                                                                                    tCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTc                                                                      >  1:314913/1‑92 (MQ=255)                                                                                                                                    tCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGc            >  1:874873/1‑150 (MQ=255)                                                                                                                                      gcgGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCgg          >  2:818933/1‑150 (MQ=255)                                                                                                                                       gctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                  <  2:1428781‑M1/95‑1 (MQ=255)                                                                                                                                       gctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                  >  1:1428781‑M1/15‑109 (MQ=255)                                                                                                                                          aTTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                  >  2:888871/1‑106 (MQ=255)                                                                                                                                          aTTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                  <  1:888871/106‑1 (MQ=255)                                                                                                                                              aTGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGcc    <  1:1614256/148‑1 (MQ=255)                                                                                                                                              aTGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGcc    >  2:1614256/1‑148 (MQ=255)                                                                                                                                              aTGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCgg  >  1:1228162/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                GTTCTACCGGCGAAGTGCGCAGGGCAGTGGGTTAGGGCTGGCGATCGTTGGCGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGG  >  NC_002947/1622379‑1622669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.