New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1622527 =	53 (0.890)	16 (0.310)	13/204	NT	28.6%	intergenic (+7/+59)	PP_1421/PP_1422	sensor histidine kinase TctE/hypothetical protein
	?	NC_002947	1622577 =	35 (0.690)					intergenic (+57/+9)	PP_1421/PP_1422	sensor histidine kinase TctE/hypothetical protein

CGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCTGC  >  NC_002947/1622430‑1622724                                                                                                                                                     |                                                                                                                                                    cGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTCGCCTGGGTAGCCCCTTTCATGGGCTCCCCCGCGAAAGGGGCGACA‑CAGGCTgg                                                                                                                                                   <  1:376219/150‑1 (MQ=255)  gagaTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGt                                                                                                                                                  >  1:1628373/1‑150 (MQ=255)   agaTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTa                                                                                                                                                 <  2:1212242/150‑1 (MQ=255)     aTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACa                                                                                                                                               <  1:1367721/150‑1 (MQ=255)      tCTGTCGGGCGCACCTGGCCCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAg                                                                                                                                              <  1:146263/150‑1 (MQ=255)         gTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTc                                                                                                                                           >  1:717423/1‑150 (MQ=255)          tCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCa                                                                                                                                          <  2:717423/150‑1 (MQ=255)                gcACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCaa                                                                                                                                    >  1:151873/1‑150 (MQ=255)                  aCCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATAGGCTCACCCGGAAAAGGGGCGACA‑CAGGCTTGGACAGCTCATCGCAACa                                                                                                                                  <  2:1252732/150‑1 (MQ=255)                   ccTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACAt                                                                                                                                 >  2:1422366/1‑150 (MQ=255)                                aCCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTcc                                                                                                                    >  1:437277/1‑150 (MQ=255)                                  ccTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCcag                                                                                                                  >  2:446367/1‑150 (MQ=255)                                                 gaAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGTGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTc                                                                                                   >  1:111694/1‑150 (MQ=255)                                                      gatgaactgctggaggcgcggagcatgttgcgctgagctgtaccagcctgtgtcgcccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAgc                                                                                                                                        >  1:1428781‑M2/96‑109 (MQ=255)                                                      gatgaactgctggaggcgcggagcatgttgcgctgagctgtaccagcctgtgtcgcccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAgc                                                                                                                                        <  2:1428781‑M2/14‑1 (MQ=255)                                                        gggTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCGGCGCCTCCAGCAGTTCATCGACCTCCAGCTCg                                                                                            >  1:539237/1‑150 (MQ=255)                                                        gggTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCg                                                                                            <  1:1607397/150‑1 (MQ=255)                                                          gTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCt                                                                                                                              >  1:964275/1‑114 (MQ=255)                                                          gTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTCCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCt                                                                                                                              <  2:964275/114‑1 (MQ=255)                                                                 gtgcgggtgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAAc                                                                                   >  1:1326887/1‑150 (MQ=255)                                                                  tgcgggtgAGCTTTATCGCGGATTGATGGTTTGCATGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACg                                                                                  <  1:678146/150‑1 (MQ=255)                                                                    cgggtgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGATCGGTGCAACACGGc                                                                                <  2:437277/150‑1 (MQ=255)                                                                          aGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAAcccc                                                                          >  1:1243312/1‑150 (MQ=255)                                                                            cTTTATCGCGGATTGATGGTTTGCCTGTGTCG‑CCCTTTCATTGGCTCCCCCGCGAAAAGGGCGACACCAGGC‑GGGAAAGCTCAACGCAACATGCTTCGCGCCTCCAGCAGTTTCACGACCTCCCGCTCGGGGCCCAACCGCAAACCCaaa                                                                       >  2:1625669/1‑148 (MQ=255)                                                                              ttATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGTCAACCCCAGAt                                                                      >  2:1590627/1‑150 (MQ=255)                                                                                 tCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTc                                                                                                                             <  2:314913/92‑1 (MQ=255)                                                                                 tCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTc                                                                                                                             >  1:314913/1‑92 (MQ=255)                                                                                 tCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGc                                                                   >  1:874873/1‑150 (MQ=255)                                                                                   gcgGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCgg                                                                 >  2:818933/1‑150 (MQ=255)                                                                                    gctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                         >  1:1428781‑M1/15‑109 (MQ=255)                                                                                    gctgagctgtaccaGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                         <  2:1428781‑M1/95‑1 (MQ=255)                                                                                       aTTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                         >  2:888871/1‑106 (MQ=255)                                                                                       aTTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                         <  1:888871/106‑1 (MQ=255)                                                                                           aTGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGcc                                                           >  2:1614256/1‑148 (MQ=255)                                                                                           aTGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGcc                                                           <  1:1614256/148‑1 (MQ=255)                                                                                           aTGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCgg                                                         >  1:1228162/1‑150 (MQ=255)                                                                                                    CTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGTCAACCCCAGATGGCGGTACGCCGgcagcgcagc                                                >  1:1590627‑M1/1‑150 (MQ=255)                                                                                                        GTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAACGCAGCCAAt                                            >  2:151873‑M1/1‑150 (MQ=255)                                                                                                          CGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATgg                                          <  2:825228‑M1/150‑1 (MQ=255)                                                                                                           GCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGc                                         <  2:607710‑M1/150‑1 (MQ=255)                                                                                                           GCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGc                                         >  1:1422366‑M1/1‑150 (MQ=255)                                                                                                            gcccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                         <  2:941926‑M2/45‑1 (MQ=255)                                                                                                            gcccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                         >  1:941926‑M2/42‑86 (MQ=255)                                                                                                            gcccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAAc                                                                                   <  2:952442‑M2/67‑1 (MQ=255)                                                                                                            gcccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAAc                                                                                   >  1:952442‑M2/42‑108 (MQ=255)                                                                                                            cgCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTAGAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGcc                                        <  2:265084‑M1/148‑1 (MQ=255)                                                                                                             cccctttcgcgggtgagcccatgaaaggggcgagacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACgg                                                                                 <  2:1246966‑M2/69‑1 (MQ=255)                                                                                                             cccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACgg                                                                                 >  1:1246966‑M2/41‑109 (MQ=255)                                                                                                             cccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCaa                                             <  1:1083059‑M2/105‑1 (MQ=255)                                                                                                             cccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCaa                                             >  2:1083059‑M2/41‑145 (MQ=255)                                                                                                             cccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGcc                                        >  1:65200‑M2/41‑150 (MQ=255)                                                                                                               cctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCgg                                      >  1:92070‑M2/39‑150 (MQ=255)                                                                                                               CTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCgg                                      <  1:1464350‑M1/149‑1 (MQ=255)                                                                                                               CTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCgg                                      >  2:1464350‑M1/1‑149 (MQ=255)                                                                                                                ctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTc                                                                                                                             <  2:189343‑M2/25‑1 (MQ=255)                                                                                                                ctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTc                                                                                                                             >  1:189343‑M2/38‑62 (MQ=255)                                                                                                                TTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTg                                    <  1:1396741‑M1/150‑1 (MQ=255)                                                                                                                 TTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGa                                   >  2:874873‑M1/1‑150 (MQ=255)                                                                                                                    aTGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                         >  1:853815/1‑77 (MQ=255)                                                                                                                    aTGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                         <  2:853815/77‑1 (MQ=255)                                                                                                                     gcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGc                                >  2:1119139‑M2/33‑150 (MQ=255)                                                                                                                      gggCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGc                                                                                >  1:69422/1‑100 (MQ=255)                                                                                                                      gggCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGc                                                                                <  2:69422/100‑1 (MQ=255)                                                                                                                       gggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATAGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGccc                              >  1:1368441‑M2/31‑150 (MQ=255)                                                                                                                        gCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCcgc                            >  1:1361283/1‑150 (MQ=255)                                                                                                                            aCCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGctg                        >  1:1009592/1‑150 (MQ=255)                                                                                                                             cccGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGctga                       <  1:818933/150‑1 (MQ=255)                                                                                                                              ccGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAAc                                                                                                                                   >  2:178954/1‑41 (MQ=255)                                                                                                                              ccGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAAc                                                                                                                                   <  1:178954/41‑1 (MQ=255)                                                                                                                              ccGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGAc                                  >  1:1631034/1‑138 (MQ=255)                                                                                                                              ccGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGAc                                  <  2:1631034/138‑1 (MQ=255)                                                                                                                               cgcgAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGctgact                     >  2:1647850/1‑150 (MQ=255)                                                                                                                               ccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATAGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGctgac                      <  2:1368441‑M2/128‑1 (MQ=255)                                                                                                                                gcgAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGctgactg                    <  1:446367/150‑1 (MQ=255)                                                                                                                                    aaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATg                 >  2:715921‑M2/18‑150 (MQ=255)                                                                                                                                     aaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGc                >  2:94083‑M2/17‑150 (MQ=255)                                                                                                                                        gggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGc             >  1:980137‑M2/14‑150 (MQ=255)                                                                                                                                          gcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGAc                                  <  2:403756‑M2/116‑1 (MQ=255)                                                                                                                                          gcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGAc                                  >  1:403756‑M2/12‑127 (MQ=255)                                                                                                                                          gcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCgg           <  2:1628373‑M2/139‑1 (MQ=255)                                                                                                                                              cacaggcTGGTACAGCTCGGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGa       >  1:213500‑M2/8‑150 (MQ=255)                                                                                                                                               acaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACg                                                                                  <  2:858142‑M2/68‑1 (MQ=255)                                                                                                                                               acaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACg                                                                                  >  1:858142‑M2/7‑74 (MQ=255)                                                                                                                                                 aggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCt    >  1:1449725‑M2/5‑150 (MQ=255)                                                                                                                                                   gcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCTGc  >  1:1473261‑M2/3‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATGGGCTCACCCGCGAAAGGGGCGACA‑CAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCTGC  >  NC_002947/1622430‑1622724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.