New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	15797 =	47 (0.790)	4 (0.070)	4/228	NT	7.9%	intergenic (+47/‑792)	gyrB/PP_5421	DNA gyrase subunit B/hypothetical protein
	?	NC_002947	15834 =	48 (0.840)					intergenic (+84/‑755)	gyrB/PP_5421	DNA gyrase subunit B/hypothetical protein

CGTGACTTCATCGAAAGTAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTCGGCGGGCGGAT  >  NC_002947/15700‑15981                                                                                                                                       |                                                                                                                                                     cgtGACTTCATCGAAAGTAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCtt                                                                                                                                       >  2:1313841/1‑150 (MQ=255)    gACTTCATCGAAAGTAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTcgc                                                                                                                                    >  1:311896/1‑150 (MQ=255)      cTTCATCGAAAGTAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCgg                                                                                                                                  <  2:71325/150‑1 (MQ=255)        tCATCGAAAGTAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGc                                                                                                                                <  1:1482160/150‑1 (MQ=255)        ccccatctgcatcattttccaatgagcggagtagggcgccccggcaggaattccaggcaaaaaaaaagcccgcgaaggcgggcttgatggTGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCa                                                                                                                                                    <  2:13397‑M1/40‑1 (MQ=255)        ccccatctgcatcattttccaatgagcggagtagggcgccccggcaggaattccaggcaaaaaaaaagcccgcgaaggcgggcttgatggTGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCa                                                                                                                                                    >  1:13397‑M1/91‑130 (MQ=255)                aGTAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑tttttttt                                                                                                                       <  1:1199144/150‑1 (MQ=255)                  tAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGc                                                                                                                     >  2:1181100/1‑150 (MQ=255)                  tAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGc                                                                                                                     <  1:1181100/150‑1 (MQ=255)                     cgcgCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTg                                                                                                                  >  2:1115475/1‑150 (MQ=255)                            tCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTcc                                                                                                           <  1:271596/150‑1 (MQ=255)                             cGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCt                                                                                                          <  1:1115475/150‑1 (MQ=255)                                    gAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTc                                                                                                            <  2:302703/141‑1 (MQ=255)                                    gAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTc                                                                                                            >  1:302703/1‑141 (MQ=255)                                    gAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTTCCgggg                                                                                                   >  1:588278/1‑150 (MQ=255)                                    gAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCgggg                                                                                                   <  1:1077312/150‑1 (MQ=255)                                     aaCCTGGACTTCTGATCAGGTGTGTAGGTAGACAGTGAAGGTGCCGGGCTGGAGGGTAACAGCAGCGGCGGTGCGGCAACCATGGCCCCTGTTGGTCACCATTAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGgc                                                                                                  >  1:29961/1‑150 (MQ=255)                                              ttCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTc                                                                                         <  1:1313841/150‑1 (MQ=255)                                                cTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCg                                                                                       <  1:561863/150‑1 (MQ=255)                                                 tGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAAACCGCCATCGCTTTC‑TTGGCTGTTCCGGTGATTCCTGCCGGGGCGCCCTACTCCGc                                                                                      >  1:1599781/1‑150 (MQ=255)                                                   aTCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTCAACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTc                                                                                    <  1:1162996/150‑1 (MQ=255)                                                        gtgtgtAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCAtt                                                                                 <  2:1642454/148‑1 (MQ=255)                                                        gtgtgtAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCAtt                                                                                 >  1:1642454/1‑148 (MQ=255)                                                        gtgtgtAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTgg                                                                               >  2:845463/1‑150 (MQ=255)                                                                gTTCACAGAAAAGCTTCACGCTTTCACCAATAGATGATCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAatgat                                                                       <  2:588278/150‑1 (MQ=255)                                                                 ttCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAatgatg                                                                      >  1:1027337/1‑150 (MQ=255)                                                                    acaGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAg                                                                   >  2:416116/1‑150 (MQ=255)                                                                                 aCGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTg                                                      >  2:612946/1‑150 (MQ=255)                                                                                  cGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGa                                                     <  2:851610/150‑1 (MQ=255)                                                                                   gCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCAGCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATGTGAg                                                    >  1:234665/1‑150 (MQ=255)                                                                                   gCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAg                                                    >  1:786093/1‑150 (MQ=255)                                                                                     tttCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGa                                                  >  2:386535/1‑150 (MQ=255)                                                                                     tttCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGa                                                  >  2:1160440/1‑150 (MQ=255)                                                                                      ttCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGCCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGaa                                                 <  1:1004207/150‑1 (MQ=255)                                                                                           aaaTAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCggg                                                                                                    <  1:854007/94‑1 (MQ=255)                                                                                           aaaTAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCggg                                                                                                    >  2:854007/1‑94 (MQ=255)                                                                                           aaaTAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGAt                                            >  2:940654/1‑150 (MQ=255)                                                                                               tggtgaccgacaggggccatggttgaagcccggccggtcaCCATCAAGCCCGCCTTCGCGGGCTTTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATgggg                                                             >  1:13397‑M2/41‑130 (MQ=255)                                                                                               tggtgaccgacaggggccatggttgaagcccggccggtcaCCATCAAGCCCGCCTTCGCGGGCTTTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATgggg                                                             <  2:13397‑M2/90‑1 (MQ=255)                                                                                                 aTGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATg                                      >  1:923134/1‑150 (MQ=255)                                                                                                 aTGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATg                                      <  2:1027337/150‑1 (MQ=255)                                                                                                  tgaccgacaggggccatggttgaagcccggccggtcaCCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATgg                                     >  2:718313‑M2/38‑150 (MQ=255)                                                                                                   GACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTcc                                                                                        >  2:786675‑M1/1‑98 (MQ=255)                                                                                                   GACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTcc                                                                                        <  1:786675‑M1/98‑1 (MQ=255)                                                                                                      CGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGcc                                                                                                       <  2:157467‑M1/80‑1 (MQ=255)                                                                                                      CGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGcc                                                                                                       >  1:157467‑M1/1‑80 (MQ=255)                                                                                                       GGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGgcgc                                <  1:1113060‑M1/150‑1 (MQ=255)                                                                                                          cggGCGTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCGGGAATTCCTGCCGGGGCGCGCTACTTCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGGGATTTGATGGGGCGCTgg                             >  1:1355040/1‑150 (MQ=255)                                                                                                            ggCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGaa                           <  2:311896/150‑1 (MQ=255)                                                                                                             gCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAg                          >  1:941094/1‑150 (MQ=255)                                                                                                                 atggttgaagcccggccggtcaCCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCt                      <  1:718313‑M2/128‑1 (MQ=255)                                                                                                                  aaCCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTg                     >  2:1616583/1‑150 (MQ=255)                                                                                                                    ctaTGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCgggg                                                                                                   <  2:1584566/68‑1 (MQ=255)                                                                                                                    ctaTGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCgggg                                                                                                   >  1:1584566/3‑70 (MQ=255)                                                                                                                    ccATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCggg                                                                                                    >  1:1611100/1‑69 (MQ=255)                                                                                                                    ccATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCggg                                                                                                    <  2:1611100/69‑1 (MQ=255)                                                                                                                      aTGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGagag                 <  1:1616583/150‑1 (MQ=255)                                                                                                                       tGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAgg                <  2:404698/150‑1 (MQ=255)                                                                                                                       tGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAgg                <  2:941094/150‑1 (MQ=255)                                                                                                                            ccTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTcgg           >  1:1123270/1‑150 (MQ=255)                                                                                                                               gTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTcggcgg        <  1:845463/150‑1 (MQ=255)                                                                                                                               gTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTcggcgg        <  1:386535/150‑1 (MQ=255)                                                                                                                                tCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCAtt                                                                                 <  1:942911/76‑1 (MQ=255)                                                                                                                                tCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCAtt                                                                                 >  2:942911/1‑76 (MQ=255)                                                                                                                                     caCCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTCGGCGGGCGGAt  <  1:416116‑M2/148‑1 (MQ=255)                                                                                                                                       |                                                                                                                                                     CGTGACTTCATCGAAAGTAACGCGCTGTCGGTGTCGAACCTGGACTTCTGATCAGGTGTGTAGGTTCACAGAAAAGCTGCACGCTTTCACAAATAGATGACCGGCCGGGCTTCAACCATGGCCCCTGTCGGTCACCATCAAGCCCGCCTTCGCGGGC‑TTTTTTTTGCCTGGAATTCCTGCCGGGGCGCCCTACTCCGCTCATTGGAAAATGATGCAGATGGGGGGATTTGAGGAAGTGATTTGATGGGGCGCTGGAAGTGCTGAGAGGGTCGGCGGGCGGAT  >  NC_002947/15700‑15981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.