New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3696196	52 (0.870)	3 (0.050)	3/232	NT	5.3%	coding (15/2502 nt)	ligD	DNA ligase D
	?	NC_002947	= 3696222	56 (0.970)					intergenic (‑12/‑179)	ligD/PP_3261	DNA ligase D/hypothetical protein

TGCAAATGACTGGCGTCGTGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATGCACCTAAGCCATAC  >  NC_002947/3696074‑3696367                                                                                                                                                      |                                                                                                                                                  tGCAAATGACTGGCGTCGTGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGg                                                                                                                                                  <  1:636186‑M2/150‑2 (MQ=255)    aaaTGACTGGCGTCGTGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGgcag                                                                                                                                               >  2:1428099‑M2/1‑146 (MQ=255)          cTGGCGTCGTGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAg                                                                                                                                         <  2:636186/150‑1 (MQ=255)           gggCGTCGTGTTTCTTGATGCAGAACTGCCGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAgg                                                                                                                                        <  2:617118/149‑1 (MQ=255)            ggCGTCGTGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGt                                                                                                                                       <  1:381640/150‑1 (MQ=255)               gtcgtGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGtctc                                                                                                                                    >  2:1123746/1‑150 (MQ=255)                tcgtGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGa                                                                                                                                              <  2:1130063/139‑1 (MQ=255)                tcgtGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGa                                                                                                                                              >  1:1130063/1‑139 (MQ=255)                 cgtGTTTCTGGATGCAGAACTTCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTa                                                                                                                                  <  1:83516/150‑1 (MQ=255)                  gtgtTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTaa                                                                                                                                 >  2:1132675/1‑150 (MQ=255)                     tttCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTctct                                                                                                                                   <  2:1035661/145‑1 (MQ=255)                     tttCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTctct                                                                                                                                   >  1:1035661/1‑145 (MQ=255)                         tGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGa                                                                                                                          <  2:748361/150‑1 (MQ=255)                                aGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCgccg                                                                                                                   <  1:299917/150‑1 (MQ=255)                                             aTGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAg                                                                                                      >  2:216473/1‑150 (MQ=255)                                              tGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATTAAGGTTTCTAAGGTGGGAGGCGCCGGCCGAGGCTGTAGt                                                                                                     <  2:62284/150‑1 (MQ=255)                                                 gCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCa                                                                                                  >  1:602495/1‑150 (MQ=255)                                                    cGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCaaaa                                                                                               <  1:216473/150‑1 (MQ=255)                                                      tttGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCaaaaaa                                                                                             <  1:1132675/150‑1 (MQ=255)                                                           cACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCaaaa                                                                                               >  1:1559149/1‑143 (MQ=255)                                                           cACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCaaaa                                                                                               <  2:1559149/143‑1 (MQ=255)                                                            aCGTTTGCGTTTGGCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCG‑CTGACTGTCAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGa                                                                                       <  1:838068/150‑1 (MQ=255)                                                             cgtttgcgtttgCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGTAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGaa                                                                                      >  1:751744/1‑150 (MQ=255)                                                              gtttgcgtttgcCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGa                                                                                       >  1:1238257/1‑148 (MQ=255)                                                              gtttgcgtttgcCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGa                                                                                       <  2:1238257/148‑1 (MQ=255)                                                                 tgcgtttgcCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCtt                                                                                  <  1:769346/150‑1 (MQ=255)                                                                     tttgcCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGgca                                                                                                                                                >  1:299109‑M2/1‑81 (MQ=255)                                                                     tttgcCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGgca                                                                                                                                                <  2:299109‑M2/84‑4 (MQ=255)                                                                          cGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCt                                                                         <  1:1134836/150‑1 (MQ=255)                                                                                  tCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCg                                                                     <  2:230850/146‑1 (MQ=255)                                                                                  tCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCg                                                                     >  1:230850/1‑146 (MQ=255)                                                                                      gtgtGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTg                                                                        <  2:1333257/139‑1 (MQ=255)                                                                                      gtgtGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑AAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTg                                                                        >  1:1333257/1‑139 (MQ=255)                                                                                        gtgGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGt                                                                                                                                       <  1:561891/74‑1 (MQ=255)                                                                                        gtgGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGt                                                                                                                                       >  2:561891/1‑74 (MQ=255)                                                                                             gTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCgg                                                                                                         >  2:1612900/1‑99 (MQ=255)                                                                                             gTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCgg                                                                                                         <  1:1612900/99‑1 (MQ=255)                                                                                                   gTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCAc                                                <  1:1123746/150‑1 (MQ=255)                                                                                                      gcgcTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGaa                                                     >  1:1111175/1‑142 (MQ=255)                                                                                                      gcgcTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGaa                                                     <  2:1111175/142‑1 (MQ=255)                                                                                                      gcgcTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTg                                             >  1:1244040/1‑150 (MQ=255)                                                                                                          ttGCGCGCGTATTCCTG‑CAGGGGCTTGNCCATGGCGGGCTNCGGGCANATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATgg                                         >  1:992274/1‑150 (MQ=255)                                                                                                              gcgcgTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGaa                                     >  1:594893/1‑150 (MQ=255)                                                                                                               cgcgTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGgcaggaatacgcgcgcaagcgcgacttcaacgccacacccgagcccagcggcaaacgcaaacgtggcaaacggtcccatgcgctgcagttctgcatccagaaacacgacgc                                    <  1:14362‑M2/150‑112 (MQ=255)                                                                                                                gcgTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACg                                   >  2:658719/1‑150 (MQ=255)                                                                                                                gcgTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACg                                   >  2:299291/1‑150 (MQ=255)                                                                                                                    aTTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGgcaggaatacgcgcgcaagcgcgacttcaacgccacacccgagcccagcggcaaacgcaaacgtggcaaacgggcccatgcgctgcagttctgca                                                    >  1:662143‑M2/1‑34 (MQ=255)                                                                                                                    aTTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGgcaggaatacgcgcgcaagcgcgacttcaacgccacacccgagcccagcggcaaacgcaaacgtggcaaacgggcccatgcgctgcagttctgca                                                    <  2:662143‑M2/129‑96 (MQ=255)                                                                                                                     ttCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACAt                              <  2:1244040/150‑1 (MQ=255)                                                                                                                        cTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCaa                                                                                                 >  2:1395468/1‑80 (MQ=255)                                                                                                                        cTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCaa                                                                                                 <  1:1395468/80‑1 (MQ=255)                                                                                                                         tG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATgacc                          <  2:751744/150‑1 (MQ=255)                                                                                                                         tG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATgacc                          <  1:299291/150‑1 (MQ=255)                                                                                                                             aGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCgg                                                                                                         >  2:753305/1‑68 (MQ=255)                                                                                                                             aGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCgg                                                                                                         <  1:753305/68‑1 (MQ=255)                                                                                                                               gggCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAAct                                                                                           >  1:1598361/1‑80 (MQ=255)                                                                                                                               gggCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAAct                                                                                           <  2:1598361/80‑1 (MQ=255)                                                                                                                               gggCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATg                                          >  1:1601170/1‑129 (MQ=255)                                                                                                                               gggCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATg                                          <  2:1601170/129‑1 (MQ=255)                                                                                                                                    tGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATg                >  2:421289/1‑150 (MQ=255)                                                                                                                                     ggCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATGc               <  2:602495/150‑1 (MQ=255)                                                                                                                                           ggCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATGCACCTaa         <  1:421289/150‑1 (MQ=255)                                                                                                                                              gggCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATGCACCTAAGcc      >  2:1597280/1‑150 (MQ=255)                                                                                                                                                 cTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATGCACCTAAGCCATa   <  1:1597280/150‑1 (MQ=255)                                                                                                                                                 cTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATGCACCTAAGCCATa   <  1:658719/150‑1 (MQ=255)                                                                                                                                                  tCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGTCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATGCACCTAAGCCATac  >  2:1192807/1‑150 (MQ=255)                                                                                                                                                     gggCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAg                                                                  <  2:922215/83‑1 (MQ=255)                                                                                                                                                     gggCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAg                                                                  >  1:922215/1‑83 (MQ=255)                                                                                                                                                      |                                                                                                                                                  TGCAAATGACTGGCGTCGTGTTTCTGGATGCAGAACTGCAGCGCATGGGCCCGTTTGCCACGTTTGCGTTTGCCGCTGGGCTCGGGTGTGGCGTTGAAGTCGCGCTTGCGCGCGTATTCCTG‑CAGGGGCTTGGCCATGGCGGGCTCCGGGCAGATCAAGGTCTCTAAGGTGGGAGGCGCCGGCCGAGGCGGTAGTTCAAAAAACTCTGAATCTTCCGTGAGCTGGCGTAGTCGACCGAATGAAGCCACCTGATGGAGAACGCACATGACCCGACCCGATGCACCTAAGCCATAC  >  NC_002947/3696074‑3696367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.