New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	227282 =	93 (1.050)	6 (0.070)	6/242	NT	5.6%	coding (108/2088 nt)	PP_0176	putative efflux transporter
	?	NC_002947	227306 =	110 (1.280)					coding (132/2088 nt)	PP_0176	putative efflux transporter

GATGTACACCGTCGCCATGGCCCAGTAGGGACGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/227318‑227282 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcGACGGTGTACATCGTCTCCAGCCCCTTCGTCGGCCCGACCAGCTCCAAGGCGTTGTACCGTGCCGTCG  >  NC_002947/227306‑227373                                                                                                           GATGTACACCGTCGCCATGGCCCAGTAGGGACGCGGCGACGGTGTACATCGTCTCCAGCCCCTTCGTCGGCCCGACCAGCTCCAAGGCGTTGTACCGTGCCGTCG  <  1:616006/105‑1 GATGTACACCGTCGCCATGGCCCAGTAGGGACGCGGCGACGGTGTACATCGTCTCCAGCCCCTTCGTCGGCCCGACCAGCTCCAAGGCGTTGTACCGTGCCGTCG  >  2:616006/1‑105           GTCGCCATGGCCCAGTAGGGACGCGGCGACGGTGTACATCGTCTCCAGCCCCTTCGTCGGCCCGACCAGCTCCAAGGCGTTG               <  1:1018651/82‑1           GTCGCCATGGCCCAGTAGGGACGCGGCGACGGTGTACATCGTCTCCAGCCCCTTCGTCGGCCCGACCAGCTCCAAGGCGTTG               >  2:1018651/1‑82               CCATGGCCCAGTAGGGACGCGGCGACGGTGTACATCGTCTCCAGCCCCTTCGTCGGCCCGACCAGCTCCAAGGCGTTGTAC            >  1:198326/1‑81               CCATGGCCCAGTAGGGACGCGGCGACGGTGTACATCGTCTCCAGCCCCTTCGTCGGCCCGACCAGCTCCAAGGCGTTGTAC            <  2:198326/81‑1                                                                                                           GATGTACACCGTCGCCATGGCCCAGTAGGGACGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/227318‑227282 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcGACGGTGTACATCGTCTCCAGCCCCTTCGTCGGCCCGACCAGCTCCAAGGCGTTGTACCGTGCCGTCG  >  NC_002947/227306‑227373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.