| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1480639 = | 86 (0.970) | 4 (0.050) | 4/236 | NT | 5.2% | coding (1106/1443 nt) | rhlB | ATP‑dependent RNA helicase RhlB |
| ? | NC_002947 | 1480673 = | 65 (0.770) | coding (1072/1443 nt) | rhlB | ATP‑dependent RNA helicase RhlB | |||||
GAGGAAAAGCTGGTACGCGACGGTATCAATGCGGCCCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1480679‑1480639‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagctTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCTGGCCAC > NC_002947/1480673‑1480820 GAGGAAAAGCTGGTACGCGACGGTATCAATGCGGCCCAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTA > 1:1206879/1‑123GAGGAAAAGCTGGTACGCGACGGTATCAATGCGGCCCAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTA < 2:1206879/123‑1 GAAAAGCTGGTACGCGACGGTATCAATGCGGCCCAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCT < 1:1100337/104‑1 GAAAAGCTGGTACGCGACGGTATCAATGCGGCCCAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCT > 2:1100337/1‑104 tacgAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCT < 2:441785/146‑1 CCAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCTGG > 1:1578609/1‑150 CCAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCTGG < 1:1878818/150‑1 CCAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGG > 1:1904198/1‑74 CCAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGG < 2:1904198/74‑1 CAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCTGGC > 2:1319576/1‑150 CAGCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCTGGC > 2:1715982/1‑150 GCTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCTGGCCA > 1:1009128/1‑150 CTTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCTGGCCAC > 1:1148665/1‑150 GAGGAAAAGCTGGTACGCGACGGTATCAATGCGGCCCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1480679‑1480639‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagctTTTCCTCGATGCGCCGCACTTCGTCCTTGCGGTTGGCGAACACCATCACCCGTTCCCACTTGTTCTGGGTCACCAGGTTGTACAACAGTTTGTACTTGTCGCTGCCGGCCACCGCATACACGTGCTGCTCCACCGTTTCGCTGGCCAC > NC_002947/1480673‑1480820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |