| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1551361 = | 107 (1.210) | 11 (0.130) | 11/242 | NT | 9.8% | intergenic (+78/+48) | groL/pykA | chaperonin GroEL/pyruvate kinase II |
| ? | NC_002947 | 1551400 = | 97 (1.130) | intergenic (+117/+9) | groL/pykA | chaperonin GroEL/pyruvate kinase II | |||||
GGGTGATCCTGACCAAGGGTGACAGCTACCACACCATCGGTGGCACCAATGGCATGAAGATCCTGCACGTCGGTGATCCGCTGGTCGGTTGATCCACTCGTTTCACAGCACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1551500‑1551361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGTCACCTTGCTCCACCAGGC > NC_002947/1551400‑1551521 GGGTGATCCTGACCAAGGGTGACAGCTACCACACCATCGGTGGCACCAATGGCATGAAGATCCTGCACGTCGGTGATCCGCTGGTCGGTTGATCCACTCGTTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGAT < 1:1462484/150‑1 CCTGACCAAGGGTGACAGCTACCACACCATCGGTGGCACCAATGGCATGAAGATCCTGCACGTCGGTGATCCGCTGGTCGGTTGATCCACTCGTTTCACAGCACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGCGAA > 1:574002/1‑133 CCTGACCAAGGGTGACAGCTACCACACCATCGGTGGCACCAATGGCATGAAGATCCTGCACGTCGGTGATCCGCTGGTCGGTTGATCCACTCGTTTCACAGCACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGCGAA < 2:574002/133‑1 GTGGCACCAATGGCATGAAGATCCTGCACGTCGGTGATCCGCTGGTCGGTTGATCCACTCGTTTCGCAGCACAAGGCT‑GCGCTTG‑‑‑AGCCTTGTGCTGTGAAACGAGTGGA < 1:1275747/110‑1 TCCACTCGTTTCACAGCACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGCGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCAC < 2:1275747/110‑1 CTCGTTTCACAGCACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGCGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGT < 2:2229423/124‑1 CTCGTTTCACAGCACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGAGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCAGTGGTGCCACCGATGGTGTGGTAGCTGT > 1:2229423/1‑124 ACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGTCACCTTG < 1:2099233/142‑1 ACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGTCACCTTG > 2:2099233/1‑142 AAGC‑GC‑‑‑AGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGTCACCTTGCTCCACCA > 1:1322878/1‑141 AAGC‑GC‑‑‑AGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGTCACCTTGCTCCACCA < 2:1322878/141‑1 TTGTGCTGCGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACC < 1:1124183/112‑1 TTGTGCTGCGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACC > 2:1124183/1‑112 AACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGTCACCTTGCTCCACCAGGC > 1:478008/1‑123 AACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGTCACCTTGCTCCACCAGGC < 2:478008/123‑1 GGGTGATCCTGACCAAGGGTGACAGCTACCACACCATCGGTGGCACCAATGGCATGAAGATCCTGCACGTCGGTGATCCGCTGGTCGGTTGATCCACTCGTTTCACAGCACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1551500‑1551361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGTCACCTTGCTCCACCAGGC > NC_002947/1551400‑1551521 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |