New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1551361 =107 (1.210)11 (0.130) 11/242 NT 9.8% intergenic (+78/+48) groL/pykA chaperonin GroEL/pyruvate kinase II
?NC_002947 1551400 = 97 (1.130)intergenic (+117/+9) groL/pykA chaperonin GroEL/pyruvate kinase II

Only 100 of 126 total aligned reads displayed.

CTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGT  >  NC_002947/1551212‑1551503
                                                                                                                                                     |                                                                                                                                                  
cTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGTGGCTTTTTTATTGCTGTCGGGGCctct                                                                                                                                                    >  2:2166638/1‑150 (MQ=255)
   ccGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCg                                                                                                                                                 <  2:736085/150‑1 (MQ=255)
     ggAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCCTGATGTAAGCAAGAGAACCTGCCCTGCACCATCAAAACACACCGGTTCGCGAGAGCCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgca                                                                                                                                               >  1:522621/1‑150 (MQ=255)
     ggAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgca                                                                                                                                               <  1:2207887/150‑1 (MQ=255)
     ggAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgca                                                                                                                                               >  1:2208376/1‑150 (MQ=255)
      gAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgcag                                                                                                                                              >  1:1454351/1‑150 (MQ=255)
      gAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCCGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgcag                                                                                                                                              <  2:1254319/150‑1 (MQ=255)
            aaGCCAGCTGCTGACATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATAATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACaac                                                                                                                                        >  2:1485562/1‑149 (MQ=255)
             aGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAgg                                                                                                                                       <  2:2299991/150‑1 (MQ=255)
              gCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGTCCGTGTCGGAGCACAAGGc                                                                                                                                      <  2:1154123/150‑1 (MQ=255)
                      ctgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGTCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTg                                                                                                                          <  1:368659/150‑1 (MQ=255)
                       tgGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGa                                                                                                                         <  1:1920563/150‑1 (MQ=255)
                       tgGCATGCCTGATATGGCTGGCATGTGTGGCATCGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGCTCGCGAGAACCGGGGCTTTTTTATTGCGGTCGGCGCCACCTCGCAGCACAAGCGT‑‑‑GC‑GCttta                                                                                                                         <  2:272664/150‑3 (MQ=255)
                           gcctggtggagcaaggtgactgggtgatcctgaccaagggtgacagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtt                                                                                                                                                    <  2:478008‑M1/1‑1 (MQ=255)
                           gcctggtggagcaaggtgactgggtgatcctgaccaagggtgacagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtt                                                                                                                                                    >  1:478008‑M1/123‑123 (MQ=255)
                            tGCCTGATATGGGTGGCATGGGTGGCCTTGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCtt                                                                                                                    >  1:1230381/1‑150 (MQ=255)
                            tGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCCGTGCGGTGGCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCtt                                                                                                                    <  2:1230381/150‑1 (MQ=255)
                            tGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCtt                                                                                                                    <  2:900705/150‑1 (MQ=255)
                              tggtggagcaaggtgactgggtgatcctgaccaagggtgacagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCACAGCACAAGGCT‑‑‑GC‑GCtt                                                                                                                           >  1:1322878‑M1/120‑141 (MQ=255)
                              tggtggagcaaggtgactgggtgatcctgaccaagggtgacagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCACAGCACAAGGCT‑‑‑GC‑GCtt                                                                                                                           <  2:1322878‑M1/22‑1 (MQ=255)
                              ccTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCgca                                                                                                                                               <  1:2166071/125‑1 (MQ=255)
                                tGATATGGGTGGCATGGGTGGCATGGGCGGCATGCTGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGc                                                                                                                >  2:335077/1‑150 (MQ=255)
                                      caaggtgactgggtgatcctgaccaagggtgacagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCACAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTtgt                                                                                                                  <  1:2099233‑M1/31‑1 (MQ=255)
                                      caaggtgactgggtgatcctgaccaagggtgacagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCACAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTtgt                                                                                                                  >  2:2099233‑M1/112‑142 (MQ=255)
                                           gcatgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCtg                                                                                                              >  1:1838615/1‑141 (MQ=255)
                                            catgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCCACATCAGGGGCTTTTTTATTGCTGGCGTGGCCTCTTCTCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGt                                                                                                    <  1:870884/150‑1 (MQ=255)
                                              tgggtggcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTgg                                                                                                  <  2:1151001/150‑1 (MQ=255)
                                                 ggtgatcctgaccaagggtgacagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCGCAGCACaa                                                                                                                                         >  2:1124183‑M1/101‑112 (MQ=255)
                                                 ggtgatcctgaccaagggtgacagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCGCAGCACaa                                                                                                                                         <  1:1124183‑M1/12‑1 (MQ=255)
                                                    gcatgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAAc                                                                                            >  1:1386427/1‑150 (MQ=255)
                                                      atgggCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCg                                                                                          >  1:686059/1‑150 (MQ=255)
                                                                    gTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCAcc                                                                            >  2:2272817/1‑150 (MQ=255)
                                                                     tAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCg                                                                           <  2:2177743/150‑1 (MQ=255)
                                                                     acagctaccacaccatcggtggcaccactggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCTCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAg                                                                                                     >  1:2229423‑M1/81‑124 (MQ=255)
                                                                     acagctaccacaccatcggtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAg                                                                                                     <  2:2229423‑M1/44‑1 (MQ=255)
                                                                        gccagccTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACg                                                                        >  2:1891032/1‑150 (MQ=255)
                                                                          cagccTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTg                                                                      >  2:1509195/1‑150 (MQ=255)
                                                                           agccTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCtg                                                                                                              >  1:107949/1‑109 (MQ=255)
                                                                           agccTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCtg                                                                                                              <  2:107949/109‑1 (MQ=255)
                                                                                   cccccTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGt                                                                                                    >  2:1396222/1‑111 (MQ=255)
                                                                                   cccccTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCtt                                                             >  1:2188090/1‑150 (MQ=255)
                                                                                      ccTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCa                                                                    >  1:640057/1‑140 (MQ=255)
                                                                                       gtggcaccaatggcatgaagatcctgcacgtcggtgatccgctggtcggttgatccactcgtTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGa                                                                                                 <  2:1275747‑M1/48‑1 (MQ=255)
                                                                                       cTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATg                                                         <  2:1386427/150‑1 (MQ=255)
                                                                                        tGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGc                                                        <  1:335077/150‑1 (MQ=255)
                                                                                         gCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGCTAAACGTACCAACGGATCACCGACGTGCAGGATCTTCATGcc                                                       >  2:1133109/1‑150 (MQ=255)
                                                                                          cACCATCAAAAAGCCCCGGTTCGCGACAACCGGGGCTTTTTAATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCa                                                      <  1:1904628/150‑1 (MQ=255)
                                                                                             cATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTg                                                   <  1:1891032/150‑1 (MQ=255)
                                                                                              aTCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTGTATTGCTGTCGGGACCTCGTAGCAGCACAAGGCT‑‑‑GG‑GCTTGAGCCTTGTGCTGTGGAAAGATTGGGTCAACCGACGAGCGAATAACAGACATGCAGGAGCTTCATGCCATTgg                                                  >  2:648878/1‑150 (MQ=255)
                                                                                               tCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGt                                                 >  1:2307248/1‑150 (MQ=255)
                                                                                                 aaaaaGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGt                                                                                                    <  1:831854/97‑1 (MQ=255)
                                                                                                 aaaaaGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGt                                                                                                    >  2:831854/1‑97 (MQ=255)
                                                                                                 aaaaaGCCCCGGTTCGCGAGAACCCGCTACGTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGc                                               <  1:1170693/150‑1 (MQ=255)
                                                                                                  aaaaGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGc                                                        <  1:1569629/140‑1 (MQ=255)
                                                                                                  aaaaGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGcc                                              >  2:1765028/1‑150 (MQ=255)
                                                                                                   aaaGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTgg                                                                                                  >  2:339717/1‑97 (MQ=255)
                                                                                                    aaGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCAc                                            <  2:1711976/150‑1 (MQ=255)
                                                                                                      gCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTTAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCACGCCATTGGTGCCACCg                                          <  2:1169167/150‑1 (MQ=255)
                                                                                                      gCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCg                                          >  2:1760535/1‑150 (MQ=255)
                                                                                                       ccccGGTTCTCGCGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCtgt                                                                                                             <  2:62525/82‑1 (MQ=255)
                                                                                                       ccccGGTTCTCGCGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCtgt                                                                                                             >  1:62525/1‑82 (MQ=255)
                                                                                                       ccccGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCTGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGa                                         >  1:1650041/1‑150 (MQ=255)
                                                                                                       ccccGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCAt                                                          >  1:2291596/1‑133 (MQ=255)
                                                                                                       ccccGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCAt                                                          <  2:2291596/133‑1 (MQ=255)
                                                                                                        cccGGTTCTCGCGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGc                                                                                                                       >  1:1953924/1‑71 (MQ=255)
                                                                                                        cccGGTTCTCGCGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGc                                                                                                                       <  2:1953924/71‑1 (MQ=38)
                                                                                                         ccGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCCGCCACCGTAC‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATg                                       >  2:1374825/1‑150 (MQ=255)
                                                                                                          cGGTTCGCGAGAACCGGGGCTTTTTTCTGTGAGGCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATgg                                      >  1:1814101/1‑150 (MQ=255)
                                                                                                          cGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATgg                                      <  2:1650041/150‑1 (MQ=255)
                                                                                                            gTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGaaa                                                                                                         <  1:518205/81‑1 (MQ=255)
                                                                                                            gTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGgtg                                    <  2:522621/150‑1 (MQ=255)
                                                                                                                     aaCCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTg                           <  2:1396892/150‑1 (MQ=255)
                                                                                                                        cGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGCGTGGATCAACCGACCCGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGCGGTAGCTGTcc                        >  1:1540809/1‑149 (MQ=255)
                                                                                                                        cGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCGGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCa                        >  2:1554728/1‑150 (MQ=255)
                                                                                                                          gggCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCAcc                      >  2:1999875/1‑150 (MQ=255)
                                                                                                                           ggCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCAccc                     >  2:833347/1‑150 (MQ=255)
                                                                                                                           ggCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCAccc                     <  2:686059/150‑1 (MQ=255)
                                                                                                                           ggCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCAccc                     <  1:1554728/150‑1 (MQ=255)
                                                                                                                            gCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCt                    <  1:1765028/150‑1 (MQ=255)
                                                                                                                              ttttttATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTg                  <  2:774288/150‑1 (MQ=255)
                                                                                                                              ttttttATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTg                  >  1:758383/1‑150 (MQ=255)
                                                                                                                              ttttttATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCCTg                  <  1:1760535/150‑1 (MQ=255)
                                                                                                                               tttttATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTgg                 <  1:2166638/150‑1 (MQ=255)
                                                                                                                                  ttATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCa              <  2:2188090/150‑1 (MQ=255)
                                                                                                                                   tATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAg             >  2:1500946/1‑150 (MQ=255)
                                                                                                                                        cTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCa        <  1:1500946/150‑1 (MQ=255)
                                                                                                                                           atccactcgtTTCACAGCACAAGGCTCAAGC‑GC‑‑‑AGCCTTGTGCTGCGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCAccc     <  1:1462484‑M1/140‑1 (MQ=255)
                                                                                                                                            tccactcgtTTCACAGCACAAGGCT‑‑‑CAAGCGC‑AGCCTTGTGCTGCGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCAc                                            <  1:1275747‑M1/101‑1 (MQ=255)
                                                                                                                                            cGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCa    <  2:2094644/150‑1 (MQ=255)
                                                                                                                                            cGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCCTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGCGTGGTAGCTGTCACCCTTGGTCAGGATCACCCa    <  1:1485562/150‑1 (MQ=255)
                                                                                                                                            cGGGGCCTATTCTCTGCACATGTAT‑‑‑GC‑GCCCGTGGCTTGTTCTCTGAAACGAGTAGATCAACCGCCCGTGCGATCGCCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCa    <  1:988140/150‑1 (MQ=255)
                                                                                                                                             ggggCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCt                    <  1:2298787/133‑1 (MQ=255)
                                                                                                                                             ggggCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCt                    >  2:2298787/1‑133 (MQ=255)
                                                                                                                                             ggggCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGATCAGGATCACCCAg   >  2:1887741/1‑150 (MQ=255)
                                                                                                                                              gggCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGgt                                     <  2:577476/115‑1 (MQ=255)
                                                                                                                                              gggCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGgt                                     >  1:577476/1‑115 (MQ=255)
                                                                                                                                              gggCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGtgtg                                  >  1:779489/1‑118 (MQ=255)
                                                                                                                                              gggCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGt  >  2:209008/1‑150 (MQ=255)
                                                                                                                                                   tctTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGAc                                                                         <  1:1127241/74‑1 (MQ=255)
                                                                                                                                                     TTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAgg            <  2:574002‑M1/133‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
CTGCCGGAAGACAAGCCAGCTGCTGGCATGCCTGATATGGGTGGCATGGGTGGCATGGGCGGCATGATGTAAGCCAGCCTTACCCCCCTGCACCATCAAAAAGCCCCGGTTCGCGAGAACCGGGGCTTTTTTATTGCTGTCGGGGCCTCTTCGCAGCACAAGGCT‑‑‑GC‑GCTTGAGCCTTGTGCTGTGAAACGAGTGGATCAACCGACCAGCGGATCACCGACGTGCAGGATCTTCATGCCATTGGTGCCACCGATGGTGTGGTAGCTGTCACCCTTGGTCAGGATCACCCAGT  >  NC_002947/1551212‑1551503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.