New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3538251 =	75 (0.850)	4 (0.050)	4/232	NT	6.0%	coding (30/1116 nt)	PP_5587	hypothetical protein
	?	NC_002947	3538275 =	56 (0.680)					coding (54/1116 nt)	PP_5587	hypothetical protein

GTAATCCGGCGCGATAATAGTGCGCGTTATACCCTTTTCCCCCGAGGTCAACAGCAATGGGTTGCTGTCGAATTCGACGGATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATTGCCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3538407‑3538251 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccgttCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATCGCGCCGGATTACACCCTGATCGGCACT  >  NC_002947/3538275‑3538422                                                                                                                                                                                                                                                                                                                   GTAATCCGGCGCGATAATAGTGCGCGTTATACCCTTTTCCCCCGAGGTCAACAGCAATGGGTTGCTGTCGAATTCGACGGATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGCCCAAGAT                                                                                                                                                             >  1:132044/1‑150     TCCGGCGCGATAATAGTGCGCGTTATACCCTTTTCCCCCGAGGTCAACAGCAATGGGTTGCTGTCGAATTCGACGGATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATTGCC                                                                                                                                                         <  2:1520819/150‑1                                 CCTTTTCCCCCGAGGTCAACAGCAATGGGTTGCTGTCGAATTCGACGGATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATT                                                                                                                                                            >  1:1851480/1‑119                                 CCTTTTCCCCCGAGGTCAACAGCAATGGGTTGCTGTCGAATTCGACGGATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATT                                                                                                                                                            <  2:1851480/119‑1                                                                 CTGTCGAATTCGACGGATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATTGCC                                                                                                                                                         >  1:748154/1‑90                                                                 CTGTCGAATTCGACGGATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATTGCC                                                                                                                                                         <  2:748154/90‑1                                                                                 ATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATTGCCGTT                                                                                                                                                      >  1:1584842/1‑77                                                                                 ATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATTGCCGTT                                                                                                                                                      <  2:1584842/77‑1                                                                                                                            CGCGTCCGTGAACGGCAAGACCAAGATTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCATCGAA                                                                                         <  1:399882/95‑1                                                                                                                            CGCGTCCGTGAACGGCAAGACCAAGATTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCATCGAA                                                                                         >  2:399882/1‑95                                                                                                                                     GAACGGCAAGACCAAGATTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGT                                                                                                            >  1:187919/1‑67                                                                                                                                     GAACGGCAAGACCAAGATTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGT                                                                                                            <  2:187919/67‑1                                                                                                                                                        GCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATCGCGCCGGATTACACCCTGATCGG      >  1:97804/1‑150                                                                                                                                                           GTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGTGCCCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATCGCGCCGGATTACACCCTGATCGGCAC   >  1:2034487/1‑150                                                                                                                                                           GTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATCGCGCCGGATTACACCCTGATCGGCAC   <  2:1853873/150‑1                                                                                                                                                            TTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATCGCGCCGGATTACACCCTGATCGGCACT  >  2:758184/1‑150                                                                                                                                                                                                                                                                                                                   GTAATCCGGCGCGATAATAGTGCGCGTTATACCCTTTTCCCCCGAGGTCAACAGCAATGGGTTGCTGTCGAATTCGACGGATGTCGGTACCACCACCGTAGACTGCCAATTTGCCGCCAGTACCGCGTCCGTGAACGGCAAGACCAAGATTGCCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3538407‑3538251 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccgttCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATCGCGCCGGATTACACCCTGATCGGCACT  >  NC_002947/3538275‑3538422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.