New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3538251 =	75 (0.850)	4 (0.050)	4/232	NT	6.0%	coding (30/1116 nt)	PP_5587	hypothetical protein
	?	NC_002947	3538275 =	56 (0.680)					coding (54/1116 nt)	PP_5587	hypothetical protein

AGATCCTGCCCGTGCGATATAAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATC  >  NC_002947/3538103‑3538395                                                                                                                                                     |                                                                                                                                                 agtgccgatcagggtgtaatccggcgcgataatagtgcgcgttatacccttttcccccgaggtcaacagcaatgggttgctgtcgaattcgacggatgtcggtaccaccaccgtagactgccaatttgccgccagtaccgcgtccgtgaa                                                                                                                                                 >  2:758184‑M1/149‑150 (MQ=255)  gtgccgatcagggtgtaatccggcgcgataatagtgcgcgttatacccttttcccccgaggtcaacagcaatgggttgctgtcgaattcgacggatgtcggtaccaccaccgtagactgccaatttgccgccagtaccgcgtccgtgAAc                                                                                                                                                <  2:1853873‑M1/3‑1 (MQ=255)  gtgccgatcagggtgtaatccggcgcgataatagtgcgcgttatacccttttcccccgaggtcaacagcaatggggcactgtcgaattcgacggatgtcggtaccaccaccgtagactgccaatttgccgccagtaccgcgtccgtgAAc                                                                                                                                                >  1:2034487‑M1/148‑150 (MQ=255)   aTCCTGCCCGTGGGATATAAGGACCTGGTGTCTGGGCGGGACATGTCAACGAACATCCAACTGCAGGCTGGAGCAACGTTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACg                                                                                                                                               <  1:1106159/150‑1 (MQ=255)   aTCCTGCCCGTGCGATATAAGGACCTGGTGTCTGGGGGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACg                                                                                                                                               >  1:213610/1‑150 (MQ=255)     ccgatcagggtgtaatccggcgcgataatagtgcgcgttatacccttttcccccgaggtcaacagcaatgggttgctgtcgaattcgacggatgtcggtaccaccaccgtagactgccaatttgccgccagtaccgcgtccgtgAACGGc                                                                                                                                             >  1:97804‑M1/145‑150 (MQ=255)      cTGCCCGTGCGATATAAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCa                                                                                                                                            >  2:979321/1‑150 (MQ=255)      cTGCCCGTGCGATATAAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCa                                                                                                                                            <  1:781873/150‑1 (MQ=255)          ccGTGCGATATAAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCt                                                                                                                                        >  2:1977338/1‑150 (MQ=255)           cGTGCGATATAAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCtt                                                                                                                                       <  1:2255357/150‑1 (MQ=255)            gTGCGATATAAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTg                                                                                                                                      <  2:555759/150‑1 (MQ=255)                  tataAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTg                                                                                                                                      <  1:1520298/144‑1 (MQ=255)                  tataAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTg                                                                                                                                      >  2:1520298/1‑144 (MQ=255)                     aaGGACCTGGTGTCTGGGCGGGACATGTGCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCg                                                                                                                             >  1:2214150/1‑150 (MQ=255)                      aGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTATAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGt                                                                                                                            >  2:2209032/1‑150 (MQ=255)                      aGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGt                                                                                                                            >  2:1572036/1‑150 (MQ=255)                       ggACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCATTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAATGGCAATTTTGGTCTTGCCGtt                                                                                                                           >  1:2263834/1‑150 (MQ=255)                        gACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTc                                                                                                                          >  1:1853873/1‑150 (MQ=255)                         cagaggTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCa                                                                                                                         >  1:81119/5‑150 (MQ=255)                          ccTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCAc                                                                                                                        <  1:1977338/150‑1 (MQ=255)                           cTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACg                                                                                                                       >  1:236718/1‑150 (MQ=255)                           cTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACg                                                                                                                       >  2:1443803/1‑150 (MQ=255)                            tGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATc                                                                                                                                         <  2:1105773/131‑1 (MQ=255)                            tGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTGTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATc                                                                                                                                         >  1:1105773/1‑131 (MQ=255)                                   tGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGt                                                                                                               >  2:1242924/1‑150 (MQ=255)                                   tGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGt                                                                                                               >  2:331125/1‑150 (MQ=255)                                   tGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGt                                                                                                               <  1:331125/150‑1 (MQ=255)                                    gggCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTa                                                                                                              <  2:236718/150‑1 (MQ=255)                                        gggACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTgg                                                                                                          <  1:1089761/150‑1 (MQ=255)                                           aCATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTggcgg                                                                                                       >  1:441833/1‑150 (MQ=255)                                             aTGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCgg                                                                                                                >  2:759910/1‑139 (MQ=255)                                             aTGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCgg                                                                                                                <  1:759910/139‑1 (MQ=255)                                               gTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCaaa                                                                                                   <  2:441833/150‑1 (MQ=255)                                               gTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCaaa                                                                                                   >  2:74419/1‑150 (MQ=255)                                                  caccaACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTg                                                                                                <  2:708058/150‑1 (MQ=255)                                                    ccaACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGc                                                                                              >  1:1578067/1‑150 (MQ=255)                                                    ccaACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGc                                                                                              >  1:797686/1‑150 (MQ=255)                                                     caACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACg                                                                                                                                               >  2:1738730/1‑100 (MQ=255)                                                     caACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACg                                                                                                                                               <  1:1738730/100‑1 (MQ=255)                                                     caACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCa                                                                                             <  2:2214150/150‑1 (MQ=255)                                                     caACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCa                                                                                             >  2:1916480/1‑150 (MQ=255)                                                       aCATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGt                                                                                           <  1:1242924/150‑1 (MQ=255)                                                            cAACTTCAGGCTGGCGATACGCTGGTCGTGCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTAGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAGTTGGCAGTCTACg                                                                                      >  2:930960/1‑150 (MQ=255)                                                                     gCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCa                                                                                                                         <  1:296565/106‑1 (MQ=255)                                                                     gCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCa                                                                                                                         >  2:296565/1‑106 (MQ=255)                                                                         gCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGa                                                                         <  2:2203433/150‑1 (MQ=255)                                                                              aCGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCTACCTTGGTCTTTCCAGGCACTGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATcc                                                                    <  1:1453023/150‑1 (MQ=255)                                                                              aCGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCCATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATcc                                                                    <  1:1916480/150‑1 (MQ=255)                                                                                gCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACg                                                                                                                       >  1:1665588/1‑97 (MQ=255)                                                                                gCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACg                                                                                                                       <  2:1665588/97‑1 (MQ=255)                                                                                gCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACa                                                                       <  1:1464094/145‑1 (MQ=255)                                                                                gCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACa                                                                       >  2:1464094/1‑145 (MQ=255)                                                                                 cTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTc                                                                 <  1:979321/150‑1 (MQ=255)                                                                                  tGGTCGTTCCTTGATCTTGCCTTTAATAAGAAAATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCg                                                                >  1:1720102/1‑150 (MQ=255)                                                                                    gTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGaa                                                              >  1:702884/1‑150 (MQ=255)                                                                                        ttcgatggatgtcggtaccaccaccgtagactgccaatttgccgccagtaccgcgtccgtgAACGGCAATCTTGGTCTTGCCGTTCACGGAcgcg                                                                                                                 >  2:399882‑M1/62‑95 (MQ=255)                                                                                        ttcgatggatgtcggtaccaccaccgtagactgccaatttgccgccagtaccgcgtccgtgAACGGCAATCTTGGTCTTGCCGTTCACGGAcgcg                                                                                                                 <  1:399882‑M1/34‑1 (MQ=255)                                                                                           cTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTATAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACa                                                       <  1:2209032/150‑1 (MQ=255)                                                                                            ttGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAg                                                      >  2:2202967/1‑150 (MQ=255)                                                                                                tCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAAc                                                  >  2:519263/1‑150 (MQ=255)                                                                                                        ttAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCt                                          <  1:312949/150‑1 (MQ=255)                                                                                                        ttAATAAGAACATTTAATGCCTCTTCTGAGAACAACTCGCATTGCAACGGCAATTTTGGTCTTGCCGTTCACTGACGCGGTACTGGCGCGACATTGTCAGTATACGCGGATGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCt                                          <  2:81119/150‑1 (MQ=255)                                                                                                           ataaGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGtt                                       <  1:74419/150‑1 (MQ=255)                                                                                                           ataaGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTCCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGtt                                       >  1:2223613/1‑150 (MQ=255)                                                                                                           ataaGAACATTTAATGCCTCTTCTTAGAACAACCCGCATGGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGtt                                       <  2:5618/150‑1 (MQ=255)                                                                                                           accaccgtagactgccaatttgccgccagtaccgcgtccgtgAACGGCAATCTTGGTCTTGCCGTTc                                                                                                                          <  2:187919‑M1/25‑1 (MQ=255)                                                                                                           accaccgtagactgccaatttgccgccagtaccgcgtccgtgAACGGCAATCTTGGTCTTGCCGTTc                                                                                                                          >  1:187919‑M1/43‑67 (MQ=255)                                                                                                              aGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGAc                                    <  2:1578067/150‑1 (MQ=255)                                                                                                               gAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATc                                                                     <  1:977127/116‑1 (MQ=255)                                                                                                               gAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATc                                                                     >  2:977127/1‑116 (MQ=255)                                                                                                                   aTTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCgg                               >  2:1472022/1‑150 (MQ=255)                                                                                                                    tttAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCTGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCggg                              <  1:1443803/150‑1 (MQ=255)                                                                                                                    tttAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCa                                                                                             <  1:475076/87‑1 (MQ=255)                                                                                                                    tttAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCa                                                                                             >  2:475076/1‑87 (MQ=255)                                                                                                                        aTGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCa                                               >  1:515629/1‑129 (MQ=255)                                                                                                                        aTGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCa                                               <  2:515629/129‑1 (MQ=255)                                                                                                                        aTGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGaa                          >  2:2048235/1‑150 (MQ=255)                                                                                                                           ccTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAAtt                                                            <  2:727613/113‑1 (MQ=255)                                                                                                                           ccTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAAtt                                                            >  1:727613/1‑113 (MQ=255)                                                                                                                              cttcttAGAACACCTCGCATTGCAACGGCGATCTTTTTCTGTCCGTTCACGGACGCGGTACTGGATGCCGACGATCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGt                    <  1:1572036/150‑1 (MQ=255)                                                                                                                               ttcttAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACggtggt                                                                                 <  2:1387340/88‑1 (MQ=255)                                                                                                                               ttcttAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACggtggt                                                                                 >  1:1387340/1‑88 (MQ=255)                                                                                                                               ttcttAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAgg                      <  2:461685/147‑1 (MQ=255)                                                                                                                               ttcttAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAgg                      >  1:461685/1‑147 (MQ=255)                                                                                                                                         aacTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCAc         >  2:325450/1‑150 (MQ=255)                                                                                                                                           cTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACta       <  1:2202967/150‑1 (MQ=255)                                                                                                                                               cATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACtattat   <  1:2048235/150‑1 (MQ=255)                                                                                                                                                aTTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATc  <  2:1720102/150‑1 (MQ=255)                                                                                                                                                aTTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATc  >  2:161260/1‑150 (MQ=255)                                                                                                                                                     AACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACAt                                                                      <  2:1584842‑M1/77‑1 (MQ=255)                                                                                                                                                     AACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACAt                                                                      >  1:1584842‑M1/1‑77 (MQ=255)                                                                                                                                                     |                                                                                                                                                 AGATCCTGCCCGTGCGATATAAGGACCTGGTGTCTGGGCGGGACATGTCCACCAACATCCAACTTCAGGCTGGCGATACGCTGGTCGTTCCTTGATCTTGCCTTTAATAAGAACATTTAATGCCTCTTCTTAGAACAACTCGCATTGCAACGGCAATCTTGGTCTTGCCGTTCACGGACGCGGTACTGGCGGCAAATTGGCAGTCTACGGTGGTGGTACCGACATCCGTCGAATTCGACAGCAACCCATTGCTGTTGACCTCGGGGGAAAAGGGTATAACGCGCACTATTATC  >  NC_002947/3538103‑3538395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.