| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3673438 | 97 (1.100) | 6 (0.070) | 6/238 | NT | 5.7% | coding (443/891 nt) | PP_3237 | universal stress protein family protein |
| ? | NC_002947 | = 3673474 | 104 (1.230) | coding (479/891 nt) | PP_3237 | universal stress protein family protein | |||||
CATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3673286‑3673438‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGGCCCCGAGCAGGTAGACCGGGACCGGGCAGTGGCGCAACAGTTTCCAGTCAAGCGGGGTGAAGAAGGCGCGCTTGAGCGCGGGCTCATGCTCGACCTGCTTGA < NC_002947/3673474‑3673327 CATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCG > 1:2022302/1‑150CATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCGACCTGCTCGGGGCCAACCG > 2:1537267/1‑150 TCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGC > 1:1145661/1‑150 TCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACC < 1:38115/147‑1 TCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACC > 2:38115/1‑147 CCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCC < 2:837860/150‑1 CATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCC > 2:1612314/1‑150 TGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGAC < 1:1612314/150‑1 ATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGG < 1:1177990/139‑1 ATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGG > 2:1177990/1‑139 GCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGC > 1:1629263/1‑116 GCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGC < 2:1629263/116‑1 GGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGGCCCCGAGCAGGTAGACCGGGACCGGGCAGTGGCGCAACAGTTTCCAGTCAAGCGGGGTGAAGAAG > 1:590292/1‑115 GGCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGGCCCCGAGCAGGTAGACCGGGACCGGGCAGTGGCGCAACAGTTTCCAGTCAAGCGGGGTGAAGAAG < 2:590292/115‑1 GCCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGGCCCCGAGCAGGGAGACCGGGACCGGGCAGTGGCGCAACAGTTTCCAGTCAAGCGGGGTGAAGAAGGCGCGCTTGAGCGCGGGCTCATGCTCGACCTGCTTG > 2:2069412/1‑150 CCACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGGCCCCGAGCAGGTAGACCGGGACCGGGCAGTGGCGCAACAGTTTCCAGTCAAGCGGGGTGAAGAAGGCGCGCTTGAGCGCGGGCTCATGCTCGACCTGCTTGA > 1:1589093/1‑150 CATCCTGGAACACGTCATGGAGATGCGACCGGACCTGCTGCTCAAGCAGGTCGAGCATGAGCCCGCGCTCAAGCGCGCCTTCTTCACCCCGCTTGACTGGAAACTGTTGCGCCACTGCCCGGTCCCGGTCTACCTGCTCGGGGCCAACCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3673286‑3673438‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccACGTCCACCGCCGCCACGACCTGGCGCGGCAACGTCGGCCGGTTGGCCCCGAGCAGGTAGACCGGGACCGGGCAGTGGCGCAACAGTTTCCAGTCAAGCGGGGTGAAGAAGGCGCGCTTGAGCGCGGGCTCATGCTCGACCTGCTTGA < NC_002947/3673474‑3673327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |