| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3928414 | 95 (1.080) | 11 (0.140) | 8/220 | NT | 11.0% | intergenic (+46/‑94) | peaE/PP_3464 | phenylacetaldehyde dehydrogenase/hypothetical protein |
| ? | NC_002947 | = 3928431 | 94 (1.200) | intergenic (+63/‑77) | peaE/PP_3464 | phenylacetaldehyde dehydrogenase/hypothetical protein | |||||
GCTGGACCCGGCGCTGCCGTTTGGTGGCTACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3928254‑3928414‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCAGACATCTT < NC_002947/3928431‑3928285 GCTGGACCCGGCGCTGCCGTTTGGTGGCTACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCTGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAAC < 1:1233324/150‑1 CTGGACCCGGCGCTGCTGTTTGGTGGCTACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACC > 1:2026064/1‑150 TGGACCCGGCGCTGCCGTTTGGTGGCTACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCTGGTAAAC < 2:786589/148‑1 TGGACCCGGCGCTGCCGTTTGGTGGCTACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCTGGTAAAC > 1:786589/1‑148 GGACCCGGCGCTGCCGTTTGGTGGCTACAAGATATTGGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCG > 1:1938856/1‑150 CAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGCATGTGATACCTGGTG < 2:941714/150‑1 CAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGCATGTGATACCTGGTG < 1:1957993/150‑1 TCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGATCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGC < 1:305160/150‑1 TGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGG < 1:1831523/150‑1 TGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGG < 2:658034/150‑1 GTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGG > 1:1879472/1‑146 GTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGG < 2:1879472/146‑1 TCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGG < 1:1456/142‑1 TCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGG > 2:1456/1‑142 GATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACA < 1:1869400/107‑1 GATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACA > 2:1869400/1‑107 TTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGCATGTGATACCTGGTGT > 1:1576973/1‑81 TTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGCATGTGATACCTGGTGT < 2:1576973/81‑1 CCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCC > 2:1938856/1‑150 CCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTAC < 2:453563/46‑1 CCCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTAC > 1:453563/1‑46 CCGCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCA > 2:1540205/1‑150 GCTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCAGA < 1:644831/150‑1 CTCCTACAGGGCTTGTGATGTTTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGACCCCATCTCACGACCAACGCCAGAC < 1:1022859/150‑1 CTCCTACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCAGAC > 1:971096/1‑150 TACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCAGACATCT > 2:1306860/1‑150 TACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCAGACATCT > 1:967097/1‑150 TACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCAGACATCT < 1:2017531/150‑1 ACAGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCAGACATCTT > 1:2216327/1‑150 AGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCATCACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCA > 2:603252/1‑128 AGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCATCACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCA < 1:603252/128‑1 GCTGGACCCGGCGCTGCCGTTTGGTGGCTACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3928254‑3928414‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaGGGCATGTGATACCTGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGAAAAAGGATCAGAGCTTGATCAACACCGATTTCAGCTCCGTGTAATGCTCGATGGCCGCTGAACCCATCTCACGACCAACGCCAGACATCTT < NC_002947/3928431‑3928285 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |