New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 392841495 (1.080)11 (0.140) 8/220 NT 11.0% intergenic (+46/‑94) peaE/PP_3464 phenylacetaldehyde dehydrogenase/hypothetical protein
?NC_002947 = 3928431 94 (1.200)intergenic (+63/‑77) peaE/PP_3464 phenylacetaldehyde dehydrogenase/hypothetical protein

Only 100 of 134 total aligned reads displayed.

TACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTAC  >  NC_002947/3928282‑3928579
                                                                                                                                                     |                                                                                                                                                      
tACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGccc                                                                                                                                                        <  1:2194336/150‑1 (MQ=255)
   aaGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCtgt                                                                                                                                                     >  1:2216327‑M2/1‑147 (MQ=255)
    aGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCtgta                                                                                                                                                    >  1:967097‑M2/1‑146 (MQ=255)
    aGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCtgta                                                                                                                                                    >  2:1306860‑M2/1‑146 (MQ=255)
    aGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCtgta                                                                                                                                                    <  1:2017531‑M2/150‑5 (MQ=255)
     gATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGCTCAAGCTATCTTGCCTGTTCCTGTCCCGGCATCTTCGCGGGTAAACAACCTCATACACAAAATATCACATTCCCTGTAg                                                                                                                                                   >  1:145135/1‑150 (MQ=255)
        gTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCtgtaggag                                                                                                                                                >  1:971096‑M2/1‑142 (MQ=255)
        gTCTGGCGTTGGTCGTGAGATGGGGTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAAACATCACAAGCCCtgtaggag                                                                                                                                                <  1:1022859‑M2/150‑9 (MQ=255)
           tGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCtgtaggagcgg                                                                                                                                             >  2:1540205‑M2/1‑139 (MQ=255)
               gTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTc                                                                                                                                         >  1:1477242/1‑150 (MQ=255)
               gTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGGAAACCCGCTCCTACACCAGCTATCACATTCCCTGTAGGAGCGGGTTc                                                                                                                                         >  2:1386396/1‑150 (MQ=255)
                  ggTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCAcc                                                                                                                                      <  2:113797/150‑1 (MQ=255)
                   gTCGTGAGATGGGTTGAGCGTCCATCCAGCATTAACTTGAGCTGAATTCGGGGTTGATTTAGCTCTTCTGCTTTTTGCTGTACCGGCCTCTTGTCGGGGGTACCCGCTTCTTCCCCAGGTATCACATGCCCTGTATGAGCGGGTTCAccc                                                                                                                                     <  2:145135/150‑1 (MQ=255)
                    tCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCcg                                                                                                                                    >  2:1128894/1‑150 (MQ=255)
                      gTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCcgcg                                                                                                                                 >  1:442886/1‑150 (MQ=255)
                       tGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGATGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCt                                                                                                                                                       <  1:603252‑M2/128‑2 (MQ=255)
                       tGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGATGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCt                                                                                                                                                       >  2:603252‑M2/1‑127 (MQ=255)
                           aTGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAagag                                                                                                                            >  1:565888/1‑150 (MQ=255)
                           aTGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAagag                                                                                                                            <  2:1477242/150‑1 (MQ=255)
                               gTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCg                                                                                                                        >  2:685872/1‑150 (MQ=255)
                                 tCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTTTACCGTCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGAAGCCGGTTCACCCGCGAACAGGCCGGc                                                                                                                      >  2:2132478/1‑150 (MQ=255)
                                    gCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGcaca                                                                                                                   >  1:2335705/1‑150 (MQ=255)
                                     cGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAg                                                                                                                  <  2:2278257/150‑1 (MQ=255)
                                      ggCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGCGAAAACCCGCTCGTACACCAGGTATCACATGCCCTGTAGGCGCGGGTTCACCCGCGAAGAGGCCGGCACAgg                                                                                                                 >  2:72964/1‑150 (MQ=255)
                                       gCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGc                                                                                                                <  2:2335705/150‑1 (MQ=255)
                                         cATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGcaa                                                                                                              >  2:2270640/1‑150 (MQ=255)
                                             gAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACaaa                                                                                                         <  2:2077793/150‑1 (MQ=255)
                                                cATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAAACTTCTCCTACACCAGGAATCAAATCCCCTCTAGAAGCGGGGTGACCCGCGAAGAGGCCGGCACAGGCCACaaaaaa                                                                                                      >  1:1905333/1‑150 (MQ=255)
                                                 atcacacGTAGCTGAAAACAGTGTTGATCAAGCTCTGATCTTTTATACTGTACCGGCATATACGCGGGTAAACCAAAAACTACACCAGGTATCACATGAATGAAAAGAGCGGGTACACAAAAGAAGATGCCGACACAGGCAACaaaaaaa                                                                                                     <  2:1079345/147‑1 (MQ=255)
                                                 aTTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACaaaaaaa                                                                                                     <  2:644831/150‑1 (MQ=255)
                                                    acacGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAaacaa                                                                                                  <  1:2303346/150‑1 (MQ=255)
                                                     cacGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAaacaac                                                                                                 >  1:302901/1‑150 (MQ=255)
                                                      acGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAaacaac                                                                                                 <  2:1553396/149‑1 (MQ=255)
                                                      acGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAaacaac                                                                                                 >  1:1553396/1‑149 (MQ=255)
                                                         gAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACTGGCTTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATa                                                                                             <  2:2155333/150‑1 (MQ=255)
                                                          aGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCACGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATaa                                                                                            <  1:312854/150‑1 (MQ=255)
                                                            cTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAag                                                                                                                              >  2:1181607/1‑115 (MQ=255)
                                                            cTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAag                                                                                                                              <  1:1181607/115‑1 (MQ=255)
                                                             tGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATaaaaa                                                                                         >  1:708755/1‑150 (MQ=255)
                                                                 aTCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTATACCAGGTATCACATTCCCTCTAGGTGCGGGTTCACCCGCGCAGCGGCCGGCTACGGCAACAAAAAAACAACAATAAAAACCAt                                                                                     >  2:524108/1‑150 (MQ=38)
                                                                 aTCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCAt                                                                                     <  2:708755/150‑1 (MQ=255)
                                                                    ggTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGa                                                                                  <  1:685872/150‑1 (MQ=255)
                                                                    ggTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGa                                                                                  <  2:442886/150‑1 (MQ=255)
                                                                       gtTGATCAAGCTCTGATACTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAAAGATGGAGCa                                                                               >  1:1045462/1‑150 (MQ=255)
                                                                        ttGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAACCCATGGAGCaa                                                                              >  1:661226/1‑150 (MQ=255)
                                                                         tGATCAAGCTCTGATCCTTTTTACTGTACCTGCCTCTTATCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAAc                                                                             <  2:22249/150‑1 (MQ=255)
                                                                            tCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAg                                                                                                                  >  1:1830835/1‑111 (MQ=255)
                                                                            tCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAAcccc                                                                          <  2:565888/150‑1 (MQ=255)
                                                                                  tctGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCAGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATgg                                                                                   >  2:290432/1‑135 (MQ=255)
                                                                                   ctGATCCTTTTTCCTGTACCGGCCTGTTCGTTGGTAAACCCGCACCTACACCAGTTATCACATGCCCTGTAGGAGCGGGTTCACCCGAGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGc                                                                   <  2:1644593/150‑1 (MQ=38)
                                                                                   ctGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGc                                                                   <  1:1234992/150‑1 (MQ=255)
                                                                                    tGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGca                                                                  >  1:559092/1‑150 (MQ=255)
                                                                                      aTCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGcaca                                                                >  2:702115/1‑150 (MQ=255)
                                                                                        ccTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCATACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGAcacaca                                                              >  2:1101153/1‑150 (MQ=255)
                                                                                          tttttCCTGTACCGGCCACTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACt                                                            >  1:1355801/1‑150 (MQ=255)
                                                                                             ttCCTGTACCAGCCTCTTCGCGAGTAAGCCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGc                                                         <  2:1183435/150‑1 (MQ=255)
                                                                                                cTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGGTCACCCGACGAAAGGCCGGCACAGGCACCAACAACACCGACAAGAACTCCAACCGACAACCCCATGAGGCACCCACTCGCCTg                                                      >  1:2269866/1‑150 (MQ=19)
                                                                                                 tGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCATGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGc                                                     >  2:1915051/1‑150 (MQ=255)
                                                                                                  gTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACCTGCCCTCTACGCGCGGGCTCACCCGCGAAGCGCCCGGCACAGGCAACAAAAAAACACCAACAACAACCATGGAGCAACCCCATGAGACACACACTCGCCTGca                                                    >  2:891229/1‑150 (MQ=37)
                                                                                                        gactctTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGcaa                                                                                                              >  1:1918097/3‑87 (MQ=255)
                                                                                                        gCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGcaa                                                                                                              <  2:1918097/87‑1 (MQ=255)
                                                                                                        gCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGca                                                    >  1:662845/1‑144 (MQ=255)
                                                                                                        gCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGca                                                    <  2:662845/144‑1 (MQ=255)
                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTc                                                           <  1:376198/135‑1 (MQ=255)
                                                                                                          ctctTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTc                                                           >  2:376198/1‑135 (MQ=255)
                                                                                                             ttCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGc                                                                   <  2:931360/124‑1 (MQ=255)
                                                                                                             ttCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGc                                                                   >  1:931360/1‑124 (MQ=255)
                                                                                                             ttCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCctg                                         >  1:1765176/1‑150 (MQ=255)
                                                                                                             ttCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCctg                                         >  2:412485/1‑150 (MQ=255)
                                                                                                              tCGCGGGTAAACCCGCTCCTCCACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCctgc                                        <  1:702222/150‑1 (MQ=255)
                                                                                                               cgcgGGTAAACCCGCTCCTACACCAGGTATCACATGACCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCctgct                                       <  2:1954030/150‑1 (MQ=255)
                                                                                                                gcgGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTg                                               <  1:1981344/141‑1 (MQ=255)
                                                                                                                gcgGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTg                                               >  2:1981344/1‑141 (MQ=255)
                                                                                                                  gggTAACCCCGCTCCTACACTAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGtt                                    <  1:2132478/150‑1 (MQ=255)
                                                                                                                    gTAAACCCGCTCCTACACCAGGTATCACATGCCCtgtaggagcggg                                                                                                                                            <  2:453563‑M2/46‑13 (MQ=255)
                                                                                                                       aaCCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCg                               <  1:1128894/150‑1 (MQ=255)
                                                                                                                        aCCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGc                              <  2:1357852/150‑1 (MQ=255)
                                                                                                                          ccGCTCCTACACCAGGTATCACATGCCCtgtaggagcgggttcacccgcgaagaggccggcacaggaaaaaggatcagagcttgatcaacaccgatttcagctccgtgtaatgctcgatggccgctgaacccatctcacgaccaacgcca                              <  1:1831523‑M2/150‑123 (MQ=255)
                                                                                                                          ccGCTCCTACACCAGGTATCACATGCCCtgtaggagcgggttcacccgcgaagaggccggcacaggaaaaaggatcagagcttgatcaacaccgatttcagctccgtgtaatgctcgatggccgctgaacccatctcacgaccaac                                  >  1:1879472‑M2/1‑28 (MQ=255)
                                                                                                                          ccGCTCCTACACCAGGTATCACATGCCCtgtaggagcgggttcacccgcgaagaggccggcacaggaaaaaggatcagagcttgatcaacaccgatttcagctccgtgtaatgctcgatggccgctgaacccatctcacgaccaac                                  <  2:1879472‑M2/146‑119 (MQ=255)
                                                                                                                          ccGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGGGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGccc                            >  1:1108537/1‑150 (MQ=255)
                                                                                                                           cGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGcccc                           >  1:1432285/1‑150 (MQ=255)
                                                                                                                            gCTCCTACACCAGGTATCACATGCCCtgtaggagcgggtttacccgcgaagaggccggtacaggaaaaaggatcagagcttgatcaacaccgatttcagctccgtgtaatgatcgatggccgctgaacccatctcacgaccaacgccaga                            <  1:305160‑M2/150‑125 (MQ=255)
                                                                                                                                  acacCAGGTATCACATGCCCtgtaggagcgggtttacccgcgaagaggccggtacaggaaaaaggatcagagcttgatcaa                                                                                           >  1:1576973‑M2/1‑20 (MQ=255)
                                                                                                                                  acacCAGGTATCACATGCCCtgtaggagcgggtttacccgcgaagaggccggtacaggaaaaaggatcagagcttgatcaa                                                                                           <  2:1576973‑M2/81‑62 (MQ=255)
                                                                                                                                   cacCAGGTATCACATGCCCtgtaggagcgggtttacccgcgaagaggccggtacaggaaaaaggatcagagcttgatcaacaccgatttcagctccgtgtaatgctcgatggccgctgaacccatctcacgaccaacgccagacatcttg                     <  1:1957993‑M2/150‑132 (MQ=255)
                                                                                                                                     ccAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGCGGCCCAAAACGGACTTACTACACTAACACTAACATCCGCAGACCATTCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCaa                 <  2:1432285/150‑1 (MQ=255)
                                                                                                                                     ccAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCaa                 <  2:1765176/150‑1 (MQ=255)
                                                                                                                                        ggTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCgccag                     <  1:1371076/143‑1 (MQ=255)
                                                                                                                                         gTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAgg                                                                    <  1:417617/95‑1 (MQ=255)
                                                                                                                                              acaTGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAgg                                                                    >  1:1245939/1‑90 (MQ=255)
                                                                                                                                              acaTGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAgg                                                                    <  2:1245939/90‑1 (MQ=255)
                                                                                                                                              acaTGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAg        >  2:313905/1‑150 (MQ=255)
                                                                                                                                               caTGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGc       >  2:29122/1‑150 (MQ=255)
                                                                                                                                                  gCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGa                                                                                  >  2:104291/1‑72 (MQ=255)
                                                                                                                                                  gCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGa                                                                                  <  1:104291/72‑1 (MQ=255)
                                                                                                                                                  gCCCTGTAGGAGCGGGTTCACCCGAGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCgcca                      <  1:748826/132‑1 (MQ=255)
                                                                                                                                                  gCCCTGTAGGAGCGGGTTCACCCGAGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCgcca                      >  2:748826/1‑132 (MQ=255)
                                                                                                                                                    ccTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTg     >  2:1952232/1‑147 (MQ=255)
                                                                                                                                                    ccTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTAc  <  2:1365806/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
TACAAGATGTCTGGCGTTGGTCGTGAGATGGGTTCAGCGGCCATCGAGCATTACACGGAGCTGAAATCGGTGTTGATCAAGCTCTGATCCTTTTTCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACACCAGGTATCACATGCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACAAAAAAACAACAATAAAAACCATGGAGCAACCCCATGAGGCACACACTCGCCTGCACATTGGCCCTGCTGTTAACCGCCCCCGCCAGCCAAGCCTACGAGCTGTAC  >  NC_002947/3928282‑3928579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.