New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4950395 =69 (0.780)34 (0.410) 31/234 NT 34.3% intergenic (‑7/+3) fliM/fliL flagellar biosynthesis switching/energizing protein/flagellar protein FliL
?NC_002947 = 5224672 NA (NA)intergenic (‑328/+51) PP_4603/PP_4604 transposase/DMT superfamily permease

TCCGGGCAAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4950550‑4950395
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCG  <  NC_002947/5224672‑5224524
                                                                                                                                                                                                                                                                                                                 
gCCGGGCAAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAG                                                                                                                                                             >  1:1960107/2‑150
TCCGGGCAAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAG                                                                                                                                                             >  1:298766/1‑150
TCCGGGCAAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAG                                                                                                                                                             >  2:2195701/1‑150
TCCGGGCAAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAG                                                                                                                                                             >  1:1563569/1‑150
  CGGGCAAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGTCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTA                                                                                                                                                           >  2:1568753/1‑150
  CGGGCAAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTA                                                                                                                                                           >  1:295276/1‑150
       AAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAG                                                                                                                                                          <  1:1131096/146‑1
       AAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAG                                                                                                                                                          >  2:1131096/1‑146
         GGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGA                                                                                                                                                      >  2:1933843/1‑148
         GGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGA                                                                                                                                                      <  1:1933843/148‑1
         GGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCCGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATC                                                                                                                                                    >  1:614702/1‑150
               GACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAG                                                                                                                                              >  2:71825/1‑150
                    CCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTT                                                                                                                                         >  1:110379/1‑150
                      TCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAG                                                                                                                                                             >  2:967842/1‑128
                      TCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAG                                                                                                                                                             <  1:967842/128‑1
                        GCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGG                                                                                                                                     <  1:71825/150‑1
                              AGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCG                                                                                                                               >  1:1204405/1‑150
                                                ATGCTGCGCCAGAAGGCACCCGCCGGGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCATCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACAT                                                                                                             <  2:1087852/150‑1
                                                    TGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGG                                                                                                         >  1:854487/1‑150
                                                     GCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGT                                                                                                        <  2:1214517/150‑1
                                                        CCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTA                                                                                                     <  2:854487/150‑1
                                                        CCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTA                                                                                                     >  1:2293638/1‑150
                                                               GCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAGGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTC                                                                                              <  2:2290983/150‑1
                                                                CCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGGAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGTCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATTAGGTGTACGGCTTCA                                                                                             <  2:825963/150‑1
                                                                  ACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAG                                                                                                          <  1:1955364/135‑1
                                                                  ACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAG                                                                                                          >  2:1955364/1‑135
                                                                    CGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTC                                                                                         <  2:1204405/150‑1
                                                                              CAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACG                                                                               >  2:1284815/1‑150
                                                                                GGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCT                                                                             >  2:1989753/1‑150
                                                                                  AAGTGGCGGAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGA                                                                           <  2:235821/150‑1
                                                                                        CGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGACATTTCGGGATGCGATGTCGCGCAGCAAACAAAGGTTCGACTTCTTCAGGTCCGCAGCGACGCTGACATTTT                                                                     <  2:614702/150‑1
                                                                                             AAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAA                                                                <  1:1284815/150‑1
                                                                                                GAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGA                                                             >  1:645863/1‑150
                                                                                                    TCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAG                                                         >  1:373377/1‑150
                                                                                                        CAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTAAAATAAAAAAAAAGAAAAGGCGG                                                     <  2:2196579/150‑1
                                                                                                                   TCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTT                                                                     >  2:737353/1‑123
                                                                                                                   TCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTT                                                                     <  1:737353/123‑1
                                                                                                                         AGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCA                                    <  2:645863/150‑1
                                                                                                                          tTTGCTGTTCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGTTTAAGTTCTGCAGCNTCGCTGAGACTTCGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAG                                   <  1:358820/149‑1
                                                                                                                             GCTGTTCACCCATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCG                                <  1:482102/150‑1
                                                                                                                                  TCACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTT                           >  1:1224106/1‑150
                                                                                                                                   CACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTT                          >  2:100861/1‑150
                                                                                                                                    ACCAATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTG                         >  1:2072054/1‑150
                                                                                                                                        ATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT                     <  2:2291542/150‑1
                                                                                                                                        ATTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT                     <  2:1318283/150‑1
                                                                                                                                         TTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT                     >  1:446175/1‑149
                                                                                                                                         TTTCGTATTGCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTT                     <  2:446175/149‑1
                                                                                                                                                  GCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTC           <  2:2072054/150‑1
                                                                                                                                                  GCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTC           <  2:373377/150‑1
                                                                                                                                                  GCAGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTC           <  1:100861/150‑1
                                                                                                                                                    gGTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTATTAGGGccagt         <  2:91373/149‑6
                                                                                                                                                     GTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTG        <  1:1611051/150‑1
                                                                                                                                                     GTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTT                            <  1:1350702/130‑1
                                                                                                                                                     GTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTT                            >  2:1350702/1‑130
                                                                                                                                                     GTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGG                                        >  2:837040/1‑118
                                                                                                                                                     GTAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGG                                        <  1:837040/118‑1
                                                                                                                                                      TAGGATATCACCCGGCCCTTCCGGGCTGCGCGTTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGT       <  2:388773/150‑1
                                                                                                                                                      TAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGT       <  2:1671547/150‑1
                                                                                                                                                      TAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGT       >  1:1899669/1‑150
                                                                                                                                                      TAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCT                             >  2:2104730/1‑128
                                                                                                                                                      TAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAG                                                                                                          <  1:1012379/51‑1
                                                                                                                                                      TAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAG                                                                                                          >  2:1012379/1‑51
                                                                                                                                                      TAGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGAGCTACTGACATGAGGGGTACGGCTTCAGTTCCGCAGCCAGGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGT       <  1:1684908/150‑1
                                                                                                                                                      TAGGAGATCACCCAGCACTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACAGTTTGAGTTCCGGAGCGACGCTGACATTTTGAAGAAGAAAAGGCGGTTGGCTCGGTAGGGCCAGCCGCCTTTTGCAGTGTTAGGGTTCGTGT       >  2:346887/1‑150
                                                                                                                                                       AGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTG      >  2:961212/1‑150
                                                                                                                                                       AGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTG      <  2:307715/150‑1
                                                                                                                                                        GGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTGGTGTGC     >  1:912416/1‑150
                                                                                                                                                        GGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGC     >  1:1389340/1‑150
                                                                                                                                                        GGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGC     >  2:1572129/1‑150
                                                                                                                                                         GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGGCATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCG    >  1:545962/1‑150
                                                                                                                                                         GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGG                                        <  2:29216/114‑1
                                                                                                                                                         GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGG                                        >  1:29216/1‑114
                                                                                                                                                         GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGC                                                                                   <  1:423647/71‑1
                                                                                                                                                         GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGC                                                                                   >  2:423647/1‑71
                                                                                                                                                         GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTT                                                                                               <  2:2287986/59‑1
                                                                                                                                                         GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTT                                                                                               >  1:2287986/1‑59
                                                                                                                                                          AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGC   <  1:2200871/150‑1
                                                                                                                                                          AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGC   >  1:1471675/1‑150
                                                                                                                                                          AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTT                                                                                               >  2:1549460/1‑58
                                                                                                                                                          AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTT                                                                                               <  1:1549460/58‑1
                                                                                                                                                           GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCG  <  1:582775/150‑1
                                                                                                                                                           GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCG  <  2:1845828/150‑1
                                                                                                                                                           GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCG  <  2:2126644/150‑1
                                                                                                                                                           GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCG  <  1:262008/150‑1
                                                                                                                                                           GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGACGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCG  >  1:570624/1‑150
                                                                                                                                                           GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCT                                                                             >  2:1255871/1‑75
                                                                                                                                                           GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCT                                                                             <  1:1255871/75‑1
                                                                                                                                                                                                                                                                                                                 
TCCGGGCAAGGGTTCGACACCCTCGCCAGCAGCCCGGTAGGGCAGGAGATGCTGCGCCAGAAGGCCACCGCGGTGGTCCAGGAAGTGGCGCAGAAGGAAGTCGGCAAGCCGGTCATCGACCAGTTGCTGTTCACCAATTTCGTATTGCAGTAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4950550‑4950395
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCGCAGCAAACATGAGGTGTACGGCTTCAGTTCCGCAGCGACGCTGACATTTTGAAAAAGAAAAGGCGGTTGGCCCGGTAGGGCCAGCCGCCTTTTGCTTTGTTAGGGTTCGTGTGCGCG  <  NC_002947/5224672‑5224524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.