| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4950395 = | 69 (0.780) | 34 (0.410) | 31/234 | NT | 34.3% | intergenic (‑7/+3) | fliM/fliL | flagellar biosynthesis switching/energizing protein/flagellar protein FliL |
| ? | NC_002947 | = 5224672 | NA (NA) | intergenic (‑328/+51) | PP_4603/PP_4604 | transposase/DMT superfamily permease | |||||
Only 100 of 178 total aligned reads displayed.
CGCACGATACGGTCCTGACTGGTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGAGGGTGTCGAACCCT > NC_002947/4950246‑4950542 | cgcgcacacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatc < 1:262008‑M1/1‑1 (MQ=255)cgcgcacacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatc < 1:582775‑M1/1‑1 (MQ=255)cGCACGATACGGTCCTGACTGGTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGAC > 2:1361333‑M1/1‑150 (MQ=255)cGCACGATACGGTCCTGACTGGTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGAC < 2:2335874‑M1/150‑1 (MQ=255) gcgcacacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatct > 1:1471675‑M1/149‑150 (MQ=255) gCACGATACGGTCCTGACTGGTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACT > 1:1179834‑M1/1‑150 (MQ=255) cgcacacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgccagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatctc > 1:545962‑M1/148‑150 (MQ=255) gcacacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTcc > 2:1572129‑M1/147‑150 (MQ=255) gcacaccaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTcc > 1:912416‑M1/147‑150 (MQ=255) aCGATACGGTCCTGACTGGTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCt > 1:2181860‑M1/1‑149 (MQ=255) cacacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCt < 2:307715‑M1/5‑1 (MQ=255) acacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTa < 2:1671547‑M1/6‑1 (MQ=255) acacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcctggctgcggaactgaagccgtacccctcatgtcagtagctcgacagcgcagcccggaagggctgggtgatCTCCTa < 1:1684908‑M1/6‑1 (MQ=255) cacgaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTAc < 1:1611051‑M1/7‑1 (MQ=255) gaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGc < 1:100861‑M1/10‑1 (MQ=255) gaaccctaacaaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGc < 2:373377‑M1/10‑1 (MQ=255) tCCTGACTGGTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAAt > 1:1508929/1‑150 (MQ=255) ccTGACTGGTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCCGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATa < 1:1383667/150‑1 (MQ=255) aaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGaaa > 1:446175‑M1/131‑149 (MQ=255) aaagcaaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAAt < 2:2291542‑M1/20‑1 (MQ=255) gTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCtcatc > 2:909655‑M1/1‑131 (MQ=255) caaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGt > 1:2072054‑M1/127‑150 (MQ=255) aaaaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTg > 2:100861‑M1/126‑150 (MQ=255) aGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCGGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTg < 2:1508929/150‑1 (MQ=255) aaggcggctggccctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTAc < 1:1350702‑M1/7‑1 (MQ=255) tCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAAc > 2:422110/1‑150 (MQ=255) aggcggttggcccggtagggccagccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTa > 2:2104730‑M1/123‑128 (MQ=255) ctggccctaccgggccaaccgccttttctttttcgaagtctcagcgangctgcagaacttaaaccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGcaaa < 1:358820‑M1/34‑2 (MQ=255) cctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatctc < 2:29216‑M1/3‑1 (MQ=255) cctaccgggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTAc > 2:837040‑M1/112‑118 (MQ=255) aTACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCg > 1:1584548/1‑150 (MQ=255) cAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCg > 1:662079/1‑150 (MQ=255) ccgccttttctttttttttattttagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTg < 2:2196579‑M1/52‑1 (MQ=255) ggATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGcc < 2:662079/150‑1 (MQ=255) aCTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGActtc > 1:2151784/1‑150 (MQ=255) tctcGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTa > 1:1922543/1‑94 (MQ=255) ttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGActtcctt < 1:1284815‑M1/63‑1 (MQ=255) tcGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccc < 1:1051949‑M1/150‑62 (MQ=255) tcGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGActtccttc > 2:181191/1‑150 (MQ=255) tCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTgcg > 2:1343353/1‑150 (MQ=255) tCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTCCAACGCGGTACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTgcg > 1:426718/1‑150 (MQ=255) aaaatgtcagcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGa > 2:737353‑M1/83‑123 (MQ=255) tGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGaaa > 2:62831/1‑99 (MQ=255) ccAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACtt > 2:295276/1‑150 (MQ=255) cAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccggg > 1:1234369‑M1/1‑78 (MQ=255) cAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGaa < 2:630747/102‑1 (MQ=255) cAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGaa > 1:630747/1‑102 (MQ=255) agcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatc > 2:1255871‑M1/75‑75 (MQ=255) agcgtcgctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTcc > 2:1989753‑M1/75‑150 (MQ=255) ccGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGATTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTgg < 2:1620619/150‑1 (MQ=255) cgtcgtCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGa < 2:1796790/150‑1 (MQ=255) cgtcgtCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGa > 1:1820106/1‑150 (MQ=255) gctgcggaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatctc > 2:423647‑M1/69‑71 (MQ=255) gtcgACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaa > 2:755653‑M1/1‑69 (MQ=255) gtcgACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGActtcctt < 1:720302/129‑1 (MQ=255) gaactgaagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACcgcg < 2:1204405‑M1/88‑1 (MQ=255) aCGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaa > 2:1400230‑M1/1‑65 (MQ=255) gCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaaag > 1:1664611‑M1/1‑63 (MQ=255) tGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGcc < 2:1584548/150‑1 (MQ=255) aagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatctc < 2:2287986‑M1/3‑1 (MQ=255) aagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatctc > 1:2287986‑M1/57‑59 (MQ=255) aagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatct < 1:1549460‑M1/2‑1 (MQ=255) aagccgtacacctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatct > 2:1549460‑M1/57‑58 (MQ=255) gCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCt < 2:2151784/150‑1 (MQ=255) cAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATa < 2:817972/68‑1 (MQ=255) cAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATa > 1:817972/1‑68 (MQ=255) cctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCgca > 1:854487‑M1/47‑150 (MQ=255) cATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCgca > 2:342672/1‑150 (MQ=255) ctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTa < 1:1012379‑M1/6‑1 (MQ=255) ctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTa > 2:1012379‑M1/46‑51 (MQ=255) ctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGt > 2:1955364‑M1/46‑135 (MQ=255) ctcatgtttgctgcgcgacagcgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGt < 1:1955364‑M1/90‑1 (MQ=255) atgtttgctgcgcgacagcgcagcccggaagggctggatgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCCCGGCGGGTGCCTTCTGGCGCAGCAt < 2:1087852‑M1/108‑1 (MQ=255) tttCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcgtccaccagttgataccccagtttccgggctttgcgaagcaaagccaggccgtgctggtcttgg > 2:130847‑M1/1‑43 (MQ=255) tttCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTg < 1:1505547/118‑1 (MQ=255) ttCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCAtctc < 1:749155/150‑1 (MQ=255) tCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGc < 1:1636420/150‑1 (MQ=255) ccTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACa < 2:497189/63‑1 (MQ=255) ccTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACa > 1:497189/1‑63 (MQ=255) ccTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGcc < 1:1093859/150‑1 (MQ=255) cagcagGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCgg < 1:422110/150‑1 (MQ=255) agcagGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCggg > 1:2035376/1‑150 (MQ=255) cgcagcccggaagggctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGgct > 1:1204405‑M1/25‑150 (MQ=255) agGTCCTGTACGGCCATTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaaagcccggacctgccggtcttggcttctggtttcgaactc < 2:1878717‑M1/150‑125 (MQ=255) tCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGCctgctg > 1:335692/1‑150 (MQ=255) ccTGTACGGCCATTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaaagcccggacctgccggtcttggcttctggtttcgaactcctca < 1:1400230‑M1/150‑129 (MQ=255) cTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGc > 1:1378326/1‑150 (MQ=255) cTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGc > 2:1960107/1‑150 (MQ=255) gTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGa < 1:2308462/150‑1 (MQ=255) gTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGa < 2:1716244/150‑1 (MQ=255) ccATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGAGGgtgt > 1:2195701/1‑150 (MQ=255) ctgggtgatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGAGGGTGTc > 2:71825‑M1/10‑150 (MQ=255) aTTGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagccgcggcgcatccttccgatattggggtcttgtttcgaactcctcaagaccttgttc > 2:61356‑M1/1‑11 (MQ=255) tGCGGACTCtcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaaagcccggacctgccggtcttggcttctggtttcgaactcctcaagaccttgttcaa < 2:1234369‑M1/150‑142 (MQ=255) gatCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCGGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGAGGGTGTCGAAccc > 1:614702‑M1/4‑150 (MQ=255) gACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGAGGGTGTCGAACCCt < 2:1490531/150‑1 (MQ=255) tCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGAGGGTGTCGAAccc < 1:1933843‑M1/147‑1 (MQ=255) tCTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGAGGGTGTCGAAccc > 2:1933843‑M1/2‑148 (MQ=255) ctctcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaaagcccggacctgccggtctt < 1:916443‑M1/108‑106 (MQ=255) ctctcatcaaacaaaatgcaacccattgttttctaagcactcaagcggccaccagttgataccccagtttccgggctttgcgaagcaaagcccggacctgccggtctt > 2:916443‑M1/1‑3 (MQ=255) | CGCACGATACGGTCCTGACTGGTCAGGTCGTAGCTTTTGATACTGCCAGGCTCGGATGCACTCTCGGTCTGCACCAGCCCGTCGTCGACGCCATGCAACAGGGCATCGATTTCATCCTGGGACAGCAGGTCCTGTACGGCCATTGCGGACTCCTACTGCAATACGAAATTGGTGAACAGCAACTGGTCGATGACCGGCTTGCCGACTTCCTTCTGCGCCACTTCCTGGACCACCGCGGTGGCCTTCTGGCGCAGCATCTCCTGCCCTACCGGGCTGCTGGCGAGGGTGTCGAACCCT > NC_002947/4950246‑4950542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |