New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5820226 =	127 (1.440)	6 (0.070)	6/246	NT	5.0%	intergenic (+19/‑81)	PP_5096/metX	shape determination factor/homoserine O‑acetyltransferase
	?	NC_002947	5820264 =	102 (1.170)					intergenic (+57/‑43)	PP_5096/metX	shape determination factor/homoserine O‑acetyltransferase

GCTACCCCCAGCGGCAAGCAAAGGCTTGCGACTGGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5820265‑5820226 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGAGCAGGGTCGATGTCAACTGTCTTTCCCGAAGATTCCGTCGGTCTGGTAGTACCGCAAACCGCCCGGTTCGATGAACCGCTGGCACTGGCCTGTGGCCGTTCACTGGCCAGTTACG  >  NC_002947/5820264‑5820412                                                                                                                                                                                               GCTACCCCCAGCGGCAAGCAAAGGCTTGCGACTGGGGGCAGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGAGCAGGGTCGATGTCAACTGTCTTTCCCGAAGATTCCGTCGGTCTGGTAGTACCGCAAACCGCCCGGTTCGATGAAC                                         >  2:1723802/1‑150   TACCCCCAGCGGCAAGCAAAGGCTTGCGACTGGGGGTAGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGA                                                                                                                     <  1:480409/72‑1   TACCCCCAGCGGCAAGCAAAGGCTTGCGACTGGGGGTAGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGA                                                                                                                     >  2:480409/1‑72       CCCAGCGGCAAGCAAAGGCTTGCGACTGGGGGCAGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGAGCAGGGTCGATGTCAACTGTCTTTCCCGAA                                                                                       >  1:2077674/1‑98       CCCAGCGGCAAGCAAAGGCTTGCGACTGGGGGCAGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGAGCAGGGTCGATGTCAACTGTCTTTCCCGAA                                                                                       <  2:2077674/98‑1                          TTGCGACTGGGGGCAGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGAGCAGGGTCGATGTCAACTGTCTTTCCCGAAGATTCCGTCGGTCTGGTAGTACCGCAAACCGCCCGGTTCGATGAACCGCTGGCACTGGCCTGTGGCCGTTC                <  1:1723802/150‑1                                        AGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGAGCAGGGTCGATGTCAACTGTCTTTCCCGAAGATTCCGTCGGTCTGGTAGTACCGCAAACCGCCCGGTTCGATGAACCGCTGGCACTGGCCTGTGGCCGTTCACTGGCCAGTTACG  >  1:109685/1‑150                                        AGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGAGCAGGGTCGATGTCAACTGTCTTTCCCGAAGATTCCGTCGGTCTGGTAGTACCGCAAACCGCCCGGTTCGATGAACCGCTGGCACTGGCCTGTGGCCGTTCACTGGCCAGTTACG  <  1:1977409/150‑1                                                                                                                                                                                               GCTACCCCCAGCGGCAAGCAAAGGCTTGCGACTGGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5820265‑5820226 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGCGCTCTTTAGACTTACGCCTCCGTCAAGCGTGAGCAGGGTCGATGTCAACTGTCTTTCCCGAAGATTCCGTCGGTCTGGTAGTACCGCAAACCGCCCGGTTCGATGAACCGCTGGCACTGGCCTGTGGCCGTTCACTGGCCAGTTACG  >  NC_002947/5820264‑5820412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.