New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1798193 =	84 (0.950)	5 (0.060)	5/244	NT	5.8%	coding (74/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798250 =	80 (0.920)					coding (131/1128 nt)	lpxB	lipid‑A‑disaccharide synthase

GCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACGTATTCATCG  >  NC_002947/1798102‑1798396                                                                                                                                                      |                                                                                                                                                   gcgGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAg                                                                                                                                                   >  1:301844/1‑150 (MQ=255)  cgGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAgg                                                                                                                                                  >  2:515655/1‑150 (MQ=255)     cATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCg                                                                                                                                               >  1:1698691/1‑150 (MQ=255)         aCGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAggg                                                                                                                                           <  2:1787071/150‑1 (MQ=255)             gcTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTg                                                                                                                                       <  1:921241/150‑1 (MQ=255)                 atatGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAAt                                                                                                                                   <  2:997679/150‑1 (MQ=255)                 atatGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAAt                                                                                                                                   <  2:301844/150‑1 (MQ=255)                      gCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCTGCTGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTAt                                                                                                                              <  2:1939392/150‑1 (MQ=255)                      gCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTAt                                                                                                                              <  2:2089067/150‑1 (MQ=255)                      gCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGCCCTGCAATCCTAt                                                                                                                              >  2:753666/1‑150 (MQ=255)                       cccagtacctcgactagccccatgacggccaggcgctccatggggaaataggatcgcaggccctcggcctccatcaaggggccgccaaccccgatgaaacgcacgtcggggtggcgcgccttgatggag                                                                                                                                                   <  2:2094254‑M2/2‑1 (MQ=255)                       cccagtacctcgactagccccatgacggccaggcgctccatggggaaataggatcgcaggccctcggcctccatcaaggggccgccaaccccgatgaaacgcacgtcggggtggcgcgccttgatggag                                                                                                                                                   >  1:2094254‑M2/128‑129 (MQ=255)                        ccAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTAttt                                                                                                                            >  2:1156468/1‑150 (MQ=255)                           gCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTccc                                                                                                                         <  2:1651266/150‑1 (MQ=255)                             tttGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCa                                                                                                                       <  2:452394/150‑1 (MQ=255)                             tttGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCa                                                                                                                       <  2:1281695/150‑1 (MQ=255)                               tGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATg                                                                                                                     <  2:645756/150‑1 (MQ=255)                                 cGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCGGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGa                                                                                                                   <  1:398337/150‑1 (MQ=255)                                     gcgcTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGCTGCGTGTCCTCAAGGCGTGC‑GAGTCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAgcgc                                                                                                               <  1:41506/150‑1 (MQ=255)                                      cgcTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATgg                                                                                                                    <  1:2112227/144‑1 (MQ=255)                                      cgcTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATgg                                                                                                                    >  2:2112227/1‑144 (MQ=255)                                        cTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTg                                                                                                            >  1:659693/1‑150 (MQ=255)                                         tGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTAAAGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCCTGGAGCGCCTgg                                                                                                           >  1:1123815/1‑150 (MQ=255)                                            tCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCg                                                                                                        <  1:2123477/150‑1 (MQ=255)                                              gCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAg                                                                                                                                             >  1:195006/1‑111 (MQ=255)                                              gCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAg                                                                                                                                             <  2:195006/111‑1 (MQ=255)                                                  gTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGGAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATgg                                                                                                  >  2:106923/1‑150 (MQ=255)                                                  gTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATgg                                                                                                  <  1:1181559/150‑1 (MQ=255)                                                    gAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTGAAGGCGCGC‑CACCCCGACGTGCGTTTCATGGGGGTTGGCGGCCCCTTGATGCAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTTGCCGTCATgggg                                                                                                >  2:735006/1‑150 (MQ=255)                                                    gAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATgggg                                                                                                <  2:1890440/150‑1 (MQ=255)                                                       gCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTa                                                                                             >  1:447351/1‑150 (MQ=255)                                                       gCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCACGAACAAAGCG‑CGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTa                                                                                             >  2:1152519/1‑150 (MQ=255)                                                            tGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGa                                                                                        <  2:659693/150‑1 (MQ=255)                                                            tGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCACGC‑TACCTTGACGTGGGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCGTATTTCCACATGGGGCGCCTGGCCGTCATGGGGGTAGTAGa                                                                                        >  1:1120719/1‑150 (MQ=255)                                                             ggCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAg                                                                                       <  2:1986577/150‑1 (MQ=255)                                                             ggCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAg                                                                                       <  2:1546585/150‑1 (MQ=255)                                                                  tatCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAg                                                                                                                                                   >  1:987301/1‑85 (MQ=255)                                                                  tatCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAg                                                                                                                                                   <  2:987301/85‑1 (MQ=255)                                                                     ctttGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTggg                                                                               <  2:1145846/148‑1 (MQ=255)                                                                     ccTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGa                                                                                                                   >  2:90013/1‑114 (MQ=255)                                                                     ccTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGa                                                                                                                   <  1:90013/114‑1 (MQ=255)                                                                     ccTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTggg                                                                               >  2:1089205/1‑150 (MQ=255)                                                                      cTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTgggg                                                                              >  1:899594/1‑150 (MQ=255)                                                                           ttCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGgc                                                                             >  1:431216/1‑146 (MQ=255)                                                                           ttCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGgc                                                                             <  2:431216/146‑1 (MQ=255)                                                                                gCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGcgcg                                                                    >  2:1236343/1‑150 (MQ=255)                                                                                        cGTGCCCTCGCGGGGCGC‑GACCCCGACGTGCGTTTCAGCGGGGTTGGCGGCCCCTTGATGGAGGAAGGGCTTCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTc                                                            <  1:735006/150‑1 (MQ=255)                                                                                          tGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGc                                                                                               <  2:116328/113‑1 (MQ=255)                                                                                          tGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGc                                                                                               >  1:116328/1‑113 (MQ=255)                                                                                          ctCCATCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCGATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTggg                                                                               >  1:2094254‑M1/3‑129 (MQ=255)                                                                                          ctCCATCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCGATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTggg                                                                               <  2:2094254‑M1/127‑1 (MQ=255)                                                                                             CCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTgg                                                                                                           <  2:307697‑M1/98‑1 (MQ=255)                                                                                             CCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTgg                                                                                                           >  1:307697‑M1/1‑98 (MQ=255)                                                                                              cTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAgcgc                                                      >  1:1400754/1‑150 (MQ=255)                                                                                               tCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGTAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGcgcc                                                     >  2:310907/1‑150 (MQ=255)                                                                                               tCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAg                                                                                       <  2:796490/116‑1 (MQ=255)                                                                                               tCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAg                                                                                       >  1:796490/1‑116 (MQ=255)                                                                                               atcaaggggccgccaaccccgatgaaacgcacgtcggggtggcgcgccttgagggAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTc                                                                                          >  2:289915‑M2/56‑114 (MQ=255)                                                                                               atcaaggggccgccaaccccgatgaaacgcacgtcggggtggcgcgccttgagggAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTc                                                                                          <  1:289915‑M2/59‑1 (MQ=255)                                                                                                        gc‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGCGGCTGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAgctgc                                            <  2:1816575/150‑1 (MQ=255)                                                                                                        gc‑CACCCCGACGTGCGGTTCATCGGGGTTGGCGGGCCCTTGATGGAGGCCTAGGGCCTGAAATCGTATTTCCCCATTCAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAgctgc                                            <  1:753666/150‑1 (MQ=255)                                                                                                        gc‑CACCCCGACGTGCCTTTTATCGTTTTTTGTGGCCGCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCCGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAgctgc                                            <  2:1123815/150‑1 (MQ=255)                                                                                                         ccaaccccgatgaaacgcacgtcggggtggcgcgccccttgatggAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAgctgc                                            >  1:1069556‑M2/46‑150 (MQ=255)                                                                                                         c‑cACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATg                                                                                                   <  2:772202/94‑1 (MQ=255)                                                                                                         c‑cACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATg                                                                                                   >  1:772202/1‑94 (MQ=255)                                                                                                           cACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGc                                                                                               <  1:1962357/97‑1 (MQ=255)                                                                                                           cACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGc                                                                                               >  2:1962357/1‑97 (MQ=255)                                                                                                           cACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGctgctg                                          >  1:1013179/1‑150 (MQ=255)                                                                                                            caaccccgatgaaacgcacgtcggggtggcgcgccttgagggAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGa                                         >  2:588808‑M2/43‑150 (MQ=255)                                                                                                              cccGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTgc                                                                       >  1:1962116/1‑118 (MQ=255)                                                                                                              cccGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTgc                                                                       <  2:1962116/118‑1 (MQ=255)                                                                                                               ccGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCaa                                                          <  2:338888/130‑1 (MQ=255)                                                                                                               ccGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCaa                                                          >  1:338888/1‑130 (MQ=255)                                                                                                               ccGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAgctg                                             >  1:172027/1‑143 (MQ=255)                                                                                                               ccGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAgctg                                             <  2:172027/143‑1 (MQ=255)                                                                                                                  aCGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGa                                   <  2:899594/150‑1 (MQ=255)                                                                                                                  aCGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGa                                   <  1:515655/150‑1 (MQ=255)                                                                                                                    gTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGTGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGAcc                                 >  1:2223632/1‑150 (MQ=255)                                                                                                                     tGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGAccc                                <  1:1236343/150‑1 (MQ=255)                                                                                                                      gCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCt                               >  2:1239294/1‑150 (MQ=255)                                                                                                                         tttCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGAt                            >  1:1647746/1‑150 (MQ=255)                                                                                                                           tCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCg                          >  1:1147228/1‑150 (MQ=255)                                                                                                                             aTCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAgctgc                                            >  1:1660218/1‑130 (MQ=255)                                                                                                                             aTCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAgctgc                                            <  2:1660218/130‑1 (MQ=255)                                                                                                                             aTCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCgaa                        >  2:1407622/1‑150 (MQ=255)                                                                                                                                ggggTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCgaagaa                     <  1:1089205/150‑1 (MQ=255)                                                                                                                                        cggcCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTACGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGa             <  1:1152519/150‑1 (MQ=255)                                                                                                                                         ggcCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGAc            >  1:1899653/1‑150 (MQ=255)                                                                                                                                         cgcgccttgagggAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGAc            <  1:588808‑M2/137‑1 (MQ=255)                                                                                                                                          gcCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACg           >  1:1138253/1‑150 (MQ=255)                                                                                                                                          gcCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACg           >  1:2001958/1‑150 (MQ=255)                                                                                                                                            cccTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACGTa         <  2:88139/150‑1 (MQ=255)                                                                                                                                              cTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGaaa                    >  2:1847139/1‑137 (MQ=255)                                                                                                                                              cTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGaaa                    <  1:1847139/137‑1 (MQ=255)                                                                                                                                              cTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACGTAtt       >  1:1319123/1‑150 (MQ=255)                                                                                                                                                  aTGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACGTATTCATc   >  2:1475615/1‑150 (MQ=255)                                                                                                                                                   tGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACGTATTCATCg  <  1:1377897/150‑1 (MQ=255)                                                                                                                                                   tGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACGTATTCATCg  <  1:866204/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   GCGGCATCACGCGCTGATATGGCCCAGCTTTGCGTAGCGCTGGTCGCCGGTGAGGCCAGTGGCGATATCCTTGGTTCAGGCTTGATGCGTGCCCTCAAGGCGCGC‑CACCCCGACGTGCGTTTCATCGGGGTTGGCGGCCCCTTGATGGAGGCCGAGGGCCTGCAATCCTATTTCCCCATGGAGCGCCTGGCCGTCATGGGGCTAGTCGAGGTACTGGGGCGCCTGCGCGAACTGCTCAAGCGCCGCAAGCTGCTGATCCAGACCCTGATCGAAGAAAAGCCCGACGTATTCATCG  >  NC_002947/1798102‑1798396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.