New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2954698	59 (0.670)	5 (0.070)	5/200	NT	9.2%	intergenic (‑158/‑123)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator
	?	NC_002947	= 2954716	51 (0.720)					intergenic (‑176/‑105)	PP_2586/PP_2587	putative amino acid transporter/LuxR family transcriptional regulator

ACCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAATGGTTCGAGCACCAGG  >  NC_002947/2954569‑2954863                                                                                                                                                    |                                                                                                                                                    cctgcggcaGGCGCCCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGCAAAGCTCGCAGCTCTGGGGCGGGTTTTTGGGCGCACACCCTGCAGGCAGCCGGAATCACCCTTTGGGGTGAGTGGACACAGCCCTTGCCCGgc                                                                                                                                                   >  2:764600‑M2/4‑148 (MQ=255)          ggCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaa                                                                                                                                          <  1:1534415‑M2/150‑12 (MQ=255)           gCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaa                                                                                                                                         >  2:2254431‑M2/1‑138 (MQ=255)               gCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggt                                                                                                                                     <  2:223273‑M2/150‑17 (MQ=255)               gCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcacaccaaagggt                                                                                                                                     >  2:915197‑M2/1‑134 (MQ=255)                    cTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGTGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggtgattc                                                                                                                                >  1:2296914‑M2/1‑129 (MQ=255)                     tCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggtgattcc                                                                                                                               <  2:2098527‑M2/150‑23 (MQ=255)                        cgACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGt                                                                                                                            <  1:940120/150‑1 (MQ=255)                        cgACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGt                                                                                                                            <  1:2098527/150‑1 (MQ=255)                        cgACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGt                                                                                                                            <  1:2013072/150‑1 (MQ=255)                              tCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGc                                                                                                                      >  1:1026525/1‑150 (MQ=255)                                   tgttgtGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAgcgc                                                                                                                 >  2:1112804/1‑150 (MQ=255)                                       gtgCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTg                                                                                                             <  1:223273/150‑1 (MQ=255)                                        tgCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGcc                                                                                                                         >  2:1064781/1‑137 (MQ=255)                                        tgCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGcc                                                                                                                         <  1:1064781/137‑1 (MQ=255)                                        tgCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTgg                                                                                                            >  2:547490/1‑150 (MQ=255)                                        tgCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTgg                                                                                                            <  1:547490/150‑1 (MQ=255)                                         gCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGGTGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGc                                                                                                                          <  1:1780583/135‑1 (MQ=255)                                         gCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGc                                                                                                                          >  2:1780583/1‑135 (MQ=255)                                         gCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTggg                                                                                                           <  1:1487608/150‑1 (MQ=255)                                           aaGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggtgattc                                                                                                                                <  2:2134976‑M2/127‑22 (MQ=255)                                           aaGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggtgattc                                                                                                                                >  1:2134976‑M2/1‑106 (MQ=255)                                              gaggTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGTACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTAt                                                                                                      <  1:1184397/150‑1 (MQ=255)                                                 gTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCCGGCAACCGGAATCACCCTTGGGGTGGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTg                                                                                                   >  1:1452392/1‑150 (MQ=255)                                                 gTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTg                                                                                                   >  1:402464/1‑150 (MQ=255)                                                    gAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTc                                                                                                >  1:448526/1‑150 (MQ=255)                                                         gAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAacga                                                                                           <  1:1157610/150‑1 (MQ=255)                                                          aaaGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAacgac                                                                                          <  2:448526/150‑1 (MQ=255)                                                               tCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagg                                                                                                                                       <  1:1678633‑M2/100‑15 (MQ=255)                                                               tCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagg                                                                                                                                       >  2:1678633‑M2/1‑86 (MQ=255)                                                                   aGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGAcgcaccgcac                                                                                 <  2:1026525/150‑1 (MQ=255)                                                                            gCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGc                                                                                                                          >  2:1985207/1‑100 (MQ=255)                                                                            gCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGc                                                                                                                          <  1:1985207/100‑1 (MQ=255)                                                                            gCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGCACCGGTTCAACGACGCACCGCACTGGcggcgg                                                                        >  1:2177/1‑150 (MQ=255)                                                                             cGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGTGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGt                                                                       <  2:995413/150‑1 (MQ=255)                                                                              gggTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGCGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGAGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCCGTg                                                                      <  1:650654/150‑1 (MQ=255)                                                                                 ttGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGt                                                                                                                            >  1:651376/1‑93 (MQ=255)                                                                                 ttGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGt                                                                                                                            <  2:651376/93‑1 (MQ=255)                                                                                   gATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACt                                                                 <  1:1165335/150‑1 (MQ=255)                                                                                    aTGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGGGTATCTGCTCAACGGCTCACCTCACTGTCGGCGGTGCCACTg                                                                <  2:1194870/150‑1 (MQ=39)                                                                                     tGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTga                                                               <  2:402464/150‑1 (MQ=255)                                                                                     tGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTga                                                               <  2:1282420/150‑1 (MQ=255)                                                                                          ccACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACTCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGATGCACCGCACTGGCGGCGGTGCCACTGAGaaaa                                                          >  2:638742/1‑150 (MQ=255)                                                                                           cacaCCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAAc                                                         <  2:1534415/150‑1 (MQ=255)                                                                                            acacCCTGCAGGCACCCTGAATCACCCATTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACg                                                        <  2:456914/150‑1 (MQ=255)                                                                                            acacCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctca                                                                                                                                                <  1:1577257‑M2/62‑6 (MQ=255)                                                                                            acacCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctca                                                                                                                                                >  2:1577257‑M2/1‑57 (MQ=255)                                                                                                 cTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAgg                                                   <  2:1621037/150‑1 (MQ=255)                                                                                                  tGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATATGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGc                                                      >  1:1516039/1‑146 (MQ=255)                                                                                                  tGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATATGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGc                                                      <  2:1516039/146‑1 (MQ=255)                                                                                                      ggCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTAc                                              >  2:826905/1‑150 (MQ=255)                                                                                                       gCACCCGGGATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTgg                                                                                                            <  2:468469/87‑1 (MQ=255)                                                                                                       gCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTgg                                                                                                            >  1:468469/1‑87 (MQ=255)                                                                                                         aCCCGGAGTCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCCAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGt                                           >  2:169118/1‑150 (MQ=255)                                                                                                          cccGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTg                                          >  1:2076793/1‑150 (MQ=255)                                                                                                           ccGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGa                                         >  2:797878/1‑150 (MQ=255)                                                                                                               aaTCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACcaa                                     <  1:925695/150‑1 (MQ=255)                                                                                                                 tCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTAGAGTGACcaatc                                   >  2:1067967/1‑150 (MQ=255)                                                                                                                    cccTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGaaaa                                                          >  1:1028529/1‑124 (MQ=255)                                                                                                                    cccTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGaaaa                                                          <  2:1028529/124‑1 (MQ=255)                                                                                                                     ccTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggtgattccgggtgcctgcagggtgtgggagcatcaacccgccccagcgctgcgagctttccgctc                                                                      <  1:1886795‑M2/111‑80 (MQ=255)                                                                                                                     ccTTTGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggtgattccgggtgcctgcagggtgtgggagcatcaacccgccccagcgctgcgagctttccgctc                                                                      >  2:1886795‑M2/1‑32 (MQ=255)                                                                                                                       tttGGGGTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggtgattccgggtgcctgcagggtgtgggagcatcaacccgccccagcgctgcgagctttacgctcgacctccttgcacaacacctgacggtcgcgagcctgctcgc                             <  1:2324912‑M2/150‑121 (MQ=255)                                                                                                                       tttGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGc                             >  1:1241545/1‑150 (MQ=255)                                                                                                                       tttGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGc                             <  1:826905/150‑1 (MQ=255)                                                                                                                          ggggTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCttt                          <  2:337664/150‑1 (MQ=255)                                                                                                                            ggTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCa                        <  1:439288/150‑1 (MQ=255)                                                                                                                             gTGAGCGGACACAGCCCTTGCCCGgctcaccccaaagggtgattccgggtgcctgcagggtgtgggagcatcaacccgccccagcgctgcgagctttccgctcgacctccttgcacaacacctgacggtcgcgagcctgctcgcctgccg                       <  1:579113‑M2/150‑127 (MQ=255)                                                                                                                               gAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGaa                     >  2:1742291/1‑150 (MQ=255)                                                                                                                                   ggACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAAt                 <  2:1241545/150‑1 (MQ=255)                                                                                                                                    gACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGaaaa                                                          <  2:2311448/108‑1 (MQ=255)                                                                                                                                    gACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGaaaa                                                          >  1:2311448/1‑108 (MQ=255)                                                                                                                                       acaGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAATGGtt             <  2:2140710/150‑1 (MQ=255)                                                                                                                                       acaGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTCTCGGCGTTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACACTGGtt             >  2:72868/1‑150 (MQ=255)                                                                                                                                         aGCCCTTGCCCGgctcaccccaaagggtgattccgggtgcctgcagggtgtgggagcatcaacccgccccagcgctgcgagctttacgctcgacctccttgcacaacacctgacggtcgcgagcctgctcgcctgccgcggtgtcctgca           >  2:2324912‑M2/1‑12 (MQ=255)                                                                                                                                         aGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAATGGTTCg           >  1:1770013/1‑150 (MQ=255)                                                                                                                                           cccTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTgg                                                                                                            >  1:2322251/1‑51 (MQ=255)                                                                                                                                           cccGTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTgg                                                                                                            <  2:2322251/51‑1 (MQ=255)                                                                                                                                            ccTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACGGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAATg                <  2:1898752/142‑1 (MQ=255)                                                                                                                                            ccTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACGGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAATg                >  1:1898752/1‑142 (MQ=255)                                                                                                                                                  ccGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAATGGTTCGAGCACCAgg  >  1:581848/1‑150 (MQ=255)                                                                                                                                                  ccGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAATGGTTCGAGCACCAgg  >  1:664737/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                    ACCGCGGCAGGCGAGCAGGCTCGCGACCGTCAGGTGTTGTGCAAGGAGGTCGAGCGGAAAGCTCGCAGCGCTGGGGCGGGTTGATGCTCCCACACCCTGCAGGCACCCGGAATCACCCTTTGGGGTGAGCGGACACAGCCCTTGCCCGGCTCACCCCAAAGGGTGATTCCGGTGCCTGCAGCGCCGTGGGAGTATCTGCTCAACGACGCACCGCACTGGCGGCGGTGCCACTGAGAAAACGGCAGGCTTACAGTGACCAATCAATTGCTTTCAGAACAATGGTTCGAGCACCAGG  >  NC_002947/2954569‑2954863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.