New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5159824	49 (0.560)	9 (0.140)	7/186	NT	17.4%	intergenic (+39/+67)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
	?	NC_002947	= 5159839	49 (0.740)					intergenic (+54/+52)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein

TCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAATCCTCCACCGCCCGCCGCA  >  NC_002947/5159691‑5159988                                                                                                                                                      |                                                                                                                                                       tCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Tt                                                                                                                                                       >  1:2222391‑M2/1‑149 (MQ=255)  cGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttg                                                                                                                                                      >  1:1936093‑M2/1‑148 (MQ=255)   gagaGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgt                                                                                                                                                     >  2:1363154‑M2/1‑147 (MQ=255)     gagTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtag                                                                                                                                                   >  2:1251466‑M2/1‑145 (MQ=255)     gagTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtag                                                                                                                                                   >  2:1761585‑M2/1‑145 (MQ=255)        tGGCAGCCACAGTGAGTTGCTGGCGCAGCAAGGGCTGTATGCACGGTTGTGGCAACCACAGGATGCAGGTTCAGAAGGGGTTGATTAATACCTGCGATGACCTTTCGCGGGTCAACCTGTTCCTACACAGGTTCGATATCA‑TTGTACGac                                                                                                                                                >  2:390880/1‑149 (MQ=255)           cAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgg                                                                                                                                             >  1:218207‑M2/1‑139 (MQ=255)             gCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggt                                                                                                                                           >  1:2312062‑M2/1‑137 (MQ=255)              ccACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtt                                                                                                                                          <  2:1002749‑M2/150‑15 (MQ=255)              ccACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtt                                                                                                                                          >  1:1979359‑M2/1‑136 (MQ=255)               cacaGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCGTTTCGCGGGGAGACGCGCTCGTACACAGGTTCGCTATCG‑Ttgtaggagcgggttt                                                                                                                                         <  2:1429317‑M2/150‑16 (MQ=255)                acaGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggt                                                                                                                                           >  2:1362541‑M2/1‑134 (MQ=255)                acaGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggt                                                                                                                                           <  1:1362541‑M2/147‑14 (MQ=255)                  aGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTAGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacc                                                                                                                                      >  1:281514‑M2/1‑132 (MQ=255)                   gTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttaccc                                                                                                                                     >  1:718540‑M2/1‑131 (MQ=255)                    tGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccg                                                                                                                                    >  1:1061993‑M2/1‑130 (MQ=255)                    tGAGTTGCTGGAGCAGCAAGGGCTGACTGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccg                                                                                                                                    <  1:1815350‑M2/150‑21 (MQ=255)                     gAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCATACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgc                                                                                                                                   >  2:870434‑M2/1‑129 (MQ=255)                       gTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcga                                                                                                                                 <  2:1585188‑M2/150‑24 (MQ=255)                          gCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaa                                                                                                                              >  1:1585188‑M2/1‑124 (MQ=255)                          gCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaa                                                                                                                              >  1:1972936‑M2/1‑124 (MQ=255)                          gCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaa                                                                                                                              >  1:1002749‑M2/1‑124 (MQ=255)                           cTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaag                                                                                                                             >  1:1475295‑M2/1‑123 (MQ=255)                            tGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgt                                                                                                                                                     <  1:2299132‑M2/125‑4 (MQ=255)                            tGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgt                                                                                                                                                     >  2:2299132‑M2/1‑122 (MQ=255)                              gAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtagaagcgggtgtacccgcgaaaaggcc                                                                                                                          <  2:54707‑M2/150‑31 (MQ=255)                              gAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCCAAGCCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggcc                                                                                                                          >  1:614267‑M2/1‑120 (MQ=255)                                    caAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGcacc                                                                                                                   >  1:1838681/1‑149 (MQ=255)                                        ggCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGAATAACCGCGAAAAGGCCGGCACAGGCa                                                                                                               >  1:1646245/1‑150 (MQ=255)                                             tATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACCGGCAAcaca                                                                                                          >  1:1832531/1‑150 (MQ=255)                                                 cccGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGAtc                                                                                                      <  1:1307249/150‑1 (MQ=255)                                                     gTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGAtctctc                                                                                                  <  2:373427/150‑1 (MQ=255)                                                          ggCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTcc                                                                                             <  1:1429317/150‑1 (MQ=255)                                                           gCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTccc                                                                                            <  1:1565895/150‑1 (MQ=255)                                                           gCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTccc                                                                                            >  1:38121/1‑150 (MQ=255)                                                             accaccAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACATGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCcgg                                                                                          <  1:54707/150‑1 (MQ=255)                                                                       cGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCa                                                                                >  1:2275937/1‑150 (MQ=255)                                                                            gTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATc                                                                           >  2:1466585/1‑150 (MQ=255)                                                                               ttGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTATGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATcccc                                                                        >  2:1780211/1‑150 (MQ=255)                                                                                tGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATccccc                                                                       <  1:390880/150‑1 (MQ=255)                                                                                  tCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACACGGTCGCTATCG‑TTGTATGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCcgc                                                                     <  1:1780211/150‑1 (MQ=255)                                                                                    ggggTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGACAACGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCgcgc                                                                   >  2:1481813/1‑150 (MQ=255)                                                                                     gggTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTAACG‑TTGTAGGACACACGTCTGACCTC‑AAGAGGCCTGCACAGGCAACCCAGAACTCCCCGCCCCGGCCCGAGGGCAACATCCCCCGCGcc                                                                  >  1:988257/1‑150 (MQ=255)                                                                                      ggTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGTAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCct                                                                 >  2:1816460/1‑150 (MQ=255)                                                                                       ctcgatcgaCACCTGCGCGGCCTTTTCGCTGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCctc                                                                >  2:273046/2‑150 (MQ=255)                                                                                             ggACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTAC‑CCTAATCGCAAAAGATTGGTGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGc                                                          <  2:1815350/149‑1 (MQ=25)                                                                                               acacCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCAGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGCCAACATCCCCCGCGCCTGTTCGGCAt                                                        >  2:879898/1‑150 (MQ=255)                                                                                                   cTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATAccc                                                    >  1:1429231/1‑150 (MQ=255)                                                                                                    tGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATAcccc                                                   >  1:855684/1‑150 (MQ=255)                                                                                                               ttCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTc                                        <  2:855684/150‑1 (MQ=255)                                                                                                                 cgcgGGTAAACCCGCTCCTACTCATTTTCTCTTTCG‑GTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCTGCATACCCCTTTACCCCTTccc                                      <  2:1646245/150‑1 (MQ=38)                                                                                                                  gcgGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCa                                                                                                 >  1:1370807/1‑90 (MQ=255)                                                                                                                  gcgGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCa                                                                                                 <  2:1370807/90‑1 (MQ=255)                                                                                                                    gggTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACACCTTGACCCCTTCCCGtt                                   >  2:2122640/1‑150 (MQ=255)                                                                                                                    gggTAAACCCGCTCCTACACAGGTTAGCTGTCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGtt                                   >  1:1481100/1‑150 (MQ=255)                                                                                                                     ggTAACCCCGCTCCTACACAGATGGGCTATCG‑GTATACGA‑CCCGGCTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGCAGGTCGGGCAACATCCCCCGCGCCTCTTCCGCATACCCCTTGACCCCTTCCCGTTc                                  <  1:879898/150‑1 (MQ=255)                                                                                                                      gTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTcc                                 >  2:334350/1‑150 (MQ=255)                                                                                                                        aaaCCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGc                                                          >  1:893069/1‑123 (MQ=255)                                                                                                                        aaaCCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGc                                                          <  2:893069/123‑1 (MQ=255)                                                                                                                          aCCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaacctccggtctggtggtgccacaaccgggcatacagcccttgctgctccagcaactcactgtggc                              <  1:215656‑M2/150‑123 (MQ=255)                                                                                                                          aCCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaa                                                                                              <  1:1296666‑M2/86‑59 (MQ=255)                                                                                                                          aCCCGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaa                                                                                              >  2:1296666‑M2/1‑28 (MQ=255)                                                                                                                           cccGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaacctccggtctggtggtgccacaaccgggcatacagcccttgctgctccagcaactcactgtggct                             <  1:1429918‑M2/150‑124 (MQ=255)                                                                                                                           cccGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGAtctct                                                                                                   >  1:516738/1‑79 (MQ=255)                                                                                                                           cccGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGAtctct                                                                                                   <  2:516738/79‑1 (MQ=255)                                                                                                                           cccGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTgcag                            >  1:562721/1‑150 (MQ=255)                                                                                                                           cccGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTgcag                            >  1:1447478/1‑150 (MQ=255)                                                                                                                            ccGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaacctccggtctggtggtgccacaaccgggcatacagcccttgctgctccagcaactcactgtggctg                            <  2:2209986‑M2/150‑125 (MQ=255)                                                                                                                            ccGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaacctccggtctggtggtgccacaaccgggcata                                                              <  2:855794‑M2/116‑91 (MQ=255)                                                                                                                            ccGCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaacctccggtctggtggtgccacaaccgggcata                                                              >  1:855794‑M2/1‑26 (MQ=255)                                                                                                                            ccGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATGTCTCAGTCCCGGCGGTAggg                                                                                  >  1:1965981/1‑95 (MQ=255)                                                                                                                            ccGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAggg                                                                                  <  2:1965981/95‑1 (MQ=255)                                                                                                                            ccGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATc                                                                           >  1:591358/1‑102 (MQ=255)                                                                                                                            ccGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATc                                                                           <  2:591358/102‑1 (MQ=255)                                                                                                                              gCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaacctccggtctggtggtgccacaaccgggcatacagcccttgctgctccagc                                           >  1:475500‑M2/1‑24 (MQ=255)                                                                                                                              gCTCCTACACAGGTTCGCTATCG‑Ttgtaggagcgggtttacccgcgaaaaggccgcgcaggtgtcaatcgaccccgacaaaacctccggtctggtggtgccacaaccgggcatacagcccttgctgctccagc                                           <  2:475500‑M2/133‑110 (MQ=255)                                                                                                                                  cTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGTGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGaaaa                     <  1:1466585/150‑1 (MQ=255)                                                                                                                                  cTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGaaaa                     >  2:338409/1‑150 (MQ=255)                                                                                                                                  cTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTACCTTCAACAGaaaa                     >  1:79018/1‑150 (MQ=255)                                                                                                                                        aGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTc                                  >  2:2048287/1‑131 (MQ=255)                                                                                                                                        aGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTc                                  <  1:2048287/131‑1 (MQ=255)                                                                                                                                          gTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAAtcctc                <  2:1287883/147‑1 (MQ=255)                                                                                                                                          gTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGATCACGCAGCAGAAAAtcctc                >  1:1287883/1‑147 (MQ=255)                                                                                                                                           ttCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAATCCTCCAcc            >  2:1323150/1‑150 (MQ=255)                                                                                                                                              gCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAATCCTCCAccgcc         >  2:1040014/1‑150 (MQ=255)                                                                                                                                                tATCG‑ATGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAATCCTCCAccgcccg       >  2:89791/1‑150 (MQ=255)                                                                                                                                                      ttGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAATCCTCCACCGCCCGCCGCa  >  2:419818/1‑150 (MQ=255)                                                                                                                                                      ttGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAATCCTCCACCGCCCGCCGCa  >  1:348609/1‑150 (MQ=255)                                                                                                                                                      ttGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACAACGACGTCGGGAGCGGGCCGAAAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAATCCTCCACCGCCCGCCGCa  >  2:1374832/1‑150 (MQ=25)                                                                                                                                                      |                                                                                                                                                       TCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACACAGGTTCGCTATCG‑TTGTAGGA‑GCGGGTTTACCCGCGAAAAGGCCGGCACAGGCAACACAGATCTCTCAGTCCCGGCGGTAGGGCAACATCCCCCGCGCCTCTTCGGCATACCCCTTGACCCCTTCCCGTTCCTGCAGCAGAAAATCCTCCACCGCCCGCCGCA  >  NC_002947/5159691‑5159988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.