New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5552384106 (1.200)7 (0.080) 7/234 NT 6.8% coding (1565/1566 nt) PP_4882 iron ABC transporter permease
?NC_002947 = 5552417 91 (1.090)intergenic (+32/+629) PP_4882/PP_5717 iron ABC transporter permease/hypothetical protein

Only 100 of 113 total aligned reads displayed.

GCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCT  >  NC_002947/5552269‑5552566
                                                                                                                                                     |                                                                                                                                                     
gCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Ac                                                                                                                                                      >  1:2244075‑M2/1‑149 (MQ=255)
  acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaa                                                                                                                                                    <  1:1973046‑M2/150‑4 (MQ=255)
  acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaa                                                                                                                                                    <  1:835735‑M2/150‑4 (MQ=255)
  acacacaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCACCATGTGGCCTGGGC‑Acaa                                                                                                                                                    <  1:336667‑M2/150‑4 (MQ=255)
      acaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagcct                                                                                                                                                <  2:914825‑M2/150‑8 (MQ=255)
      acaGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagcct                                                                                                                                                >  1:1515611‑M2/1‑143 (MQ=255)
          ccAACGTCGAGTGCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGTGGTGGCCGGTGTCTTTGCTGCCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGt                                                                                                                                            <  2:315841/150‑1 (MQ=255)
            aaCGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGc                                                                                                                                          >  2:1973866/1‑150 (MQ=255)
               gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAATGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTa                                                                                                                                       >  1:945884/1‑150 (MQ=255)
               gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGc‑aa                                                                                                                                                      <  1:1972425/135‑2 (MQ=255)
               gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGc‑aa                                                                                                                                                      >  2:1972425/1‑134 (MQ=255)
               gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTa                                                                                                                                       <  2:1363133/150‑1 (MQ=255)
               gTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATGTGCTGACTACGGGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGCGCCTa                                                                                                                                       >  1:2209038/1‑150 (MQ=255)
                tCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAg                                                                                                                                      >  1:623721/1‑150 (MQ=255)
                  gAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCAAGGCCACCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGAc                                                                                                                                    <  2:336667/150‑1 (MQ=255)
                     ttCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTtc                                                                                                                                 >  2:917842/1‑150 (MQ=255)
                            cggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACaa                                                                                                                          <  1:378697/150‑1 (MQ=255)
                            cggcggcgCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACaa                                                                                                                          <  2:846158/150‑1 (MQ=255)
                                  cgcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCAc                                                                                                                    <  2:2212830/150‑1 (MQ=255)
                                   gcCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                                                   <  1:1839513/150‑1 (MQ=255)
                                      gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                                                   <  2:2324204/147‑1 (MQ=255)
                                      gTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                                                   >  1:2324204/1‑147 (MQ=255)
                                       tATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTaa                                                                                                               <  1:820033/150‑1 (MQ=255)
                                          gcggcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAAc                                                                                                            >  1:2127836/1‑150 (MQ=255)
                                             gcgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAActcc                                                                                                         <  2:1973046/150‑2 (MQ=255)
                                              cgTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACtctc                                                                                                        <  1:183840/150‑1 (MQ=255)
                                                ttgttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCAc                                                                                                      <  1:1020556/150‑1 (MQ=255)
                                                  gttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                                                    <  1:914825/150‑1 (MQ=255)
                                                  gttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                                                    <  2:184292/150‑1 (MQ=255)
                                                  gttgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTa                                                                                                    >  1:184292/1‑150 (MQ=255)
                                                    tgATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc                                                                                                  <  1:1145434/150‑1 (MQ=255)
                                                     gATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCa                                                                                                       <  2:2172631/144‑1 (MQ=255)
                                                      aTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCa                                                                                                >  2:1559214/1‑150 (MQ=255)
                                                      aTTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCa                                                                                                <  1:244339/150‑1 (MQ=255)
                                                           ggtgTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACt                                                                                                                   <  1:2150308/126‑1 (MQ=255)
                                                            gtgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGa                                                                                                                                              >  2:431843/1‑98 (MQ=255)
                                                            gtgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGa                                                                                                                                              <  1:431843/98‑1 (MQ=255)
                                                             tgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                         <  2:1340053/150‑1 (MQ=255)
                                                             tgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACCTTAAACCTCTCACTAGCCAGTTGaaa                                                                                         <  2:1529893/150‑1 (MQ=255)
                                                             tgtCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCAGGTCGCCTGCGC‑TCAAGCCTCAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                         <  2:1529841/150‑1 (MQ=255)
                                                               tCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTc                                                                                                                      <  2:887157/119‑1 (MQ=255)
                                                               tCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTc                                                                                                                      >  1:887157/1‑119 (MQ=255)
                                                               gcGGGGTTTCCGGTGGATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGc                                                                                       <  2:2005436/149‑1 (MQ=255)
                                                                   ggTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg                                                                                   <  1:279531/150‑1 (MQ=255)
                                                                   ggTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg                                                                                   <  1:917842/150‑1 (MQ=255)
                                                                        ccGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc                                                                                                  <  2:890757/130‑1 (MQ=255)
                                                                        ccGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGc                                                                                                  >  1:890757/1‑130 (MQ=255)
                                                                        ccGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTAGTAAAGAGTTCACTCAATTACTCGCACGAGCCAGTTGAAAGCAAAGAaaaa                                                                              >  2:1777776/1‑150 (MQ=255)
                                                                         cGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAg                                                                             >  2:296105/1‑150 (MQ=255)
                                                                         cGGTGTATGTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGACAGCAAAGCACAAg                                                                             <  2:623721/150‑1 (MQ=255)
                                                                             gtATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCACATGGCGGCCTGGGc‑aa                                                                                                                                                      >  1:1617336/1‑72 (MQ=25)
                                                                                    cTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAtac                                                                  <  2:340982/150‑1 (MQ=255)
                                                                                       aCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                                                           >  1:250077/1‑122 (MQ=255)
                                                                                       aCTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGa                                                                                           <  2:250077/122‑1 (MQ=255)
                                                                                        cTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                                                          >  2:386193/1‑138 (MQ=255)
                                                                                        cTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                                                          <  1:386193/138‑1 (MQ=255)
                                                                                              ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg                                                                                   >  2:2256130/1‑123 (MQ=255)
                                                                                              ggATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAg                                                                                   <  1:2256130/123‑1 (MQ=255)
                                                                                                 tGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCcccacc                                                     <  2:1945044/150‑1 (MQ=255)
                                                                                                    aTTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACtctc                                                                                                        >  1:886580/1‑96 (MQ=255)
                                                                                                    aTTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACtctc                                                                                                        <  2:886580/96‑1 (MQ=255)
                                                                                                     tttGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAag                                                 >  1:1649910/1‑150 (MQ=255)
                                                                                                     tttGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAag                                                 >  1:568545/1‑150 (MQ=255)
                                                                                                        gAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAgg                                              <  2:2127836/150‑1 (MQ=255)
                                                                                                         aaCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAggg                                             <  1:296105/150‑1 (MQ=255)
                                                                                                          aCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccagaatcaacaacgccgcatacggcgccgccgccgcgaactcgacgttggc                                            <  1:2261120‑M2/150‑108 (MQ=255)
                                                                                                          aCAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCCGGTT‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTATAAGCCCCACCCAAGAGGGt                                            <  1:1777776/150‑1 (MQ=255)
                                                                                                           cAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgc                                                                    >  2:261854‑M2/1‑42 (MQ=255)
                                                                                                            aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑Acaagccttgttcaaatacatccgcgtagtcagcaaatacac                                                                                                              >  1:1965819‑M2/1‑41 (MQ=255)
                                                                                                            aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAta                                                                   >  1:1472584/1‑125 (MQ=255)
                                                                                                            aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGAta                                                                   <  2:1472584/125‑1 (MQ=255)
                                                                                                            aaGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAACAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTaa                                          >  2:915419/1‑150 (MQ=255)
                                                                                                                 ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCGAgctttcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcga                                                    >  2:204119‑M2/1‑37 (MQ=255)
                                                                                                                 ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGCGAgctttcaagccttgttcaaatacatccgcgtagtcagcaaatacaccggcaaccccgacaccacaatcaacaacgccgcatacggcgccgccgccgcga                                                    <  1:204119‑M2/136‑100 (MQ=255)
                                                                                                                 ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCGTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa                                     >  2:1908000/1‑150 (MQ=255)
                                                                                                                 ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa                                     <  1:1838736/150‑1 (MQ=255)
                                                                                                                 ttGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa                                     >  1:778616/1‑150 (MQ=255)
                                                                                                                   gAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                         >  2:163337/1‑96 (MQ=255)
                                                                                                                   gAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGaaa                                                                                         <  1:163337/96‑1 (MQ=255)
                                                                                                                    aaaGCCTGCCCAGGCCACAATGTGACCTGGGC‑ACAAGCCTTAGTGTCTACATTTCATCACAAGTTCACTTTAAACCTCTCACTAGCCAGTTCAACGCAAATAACAAGGTCGTAGATACTACAAACCCCACCCAAGAGGGTAACAAAActc                                  <  2:2209038/150‑1 (MQ=255)
                                                                                                                            cccAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACaaaa                                     <  2:387744/139‑1 (MQ=255)
                                                                                                                            cccAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATa                          >  1:1086589/1‑150 (MQ=255)
                                                                                                                              cAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGccc                                                         >  1:692259/1‑117 (MQ=255)
                                                                                                                              cAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGccc                                                         <  2:692259/117‑1 (MQ=255)
                                                                                                                               aGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTCGCCTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGGACAAGGTCGTAGATACTACAAGCCCCACCCAAGTGGGTAACAAAACTTTTTTTATAGaa                       >  1:355675/1‑149 (MQ=255)
                                                                                                                                ggCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCtt                                >  1:1743347/1‑140 (MQ=255)
                                                                                                                                ggCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCtt                                <  2:1743347/140‑1 (MQ=255)
                                                                                                                                 gccgccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCt                     <  1:1973866/150‑1 (MQ=255)
                                                                                                                                   cgccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTc                                                                          >  1:308616/1‑95 (MQ=255)
                                                                                                                                   cgccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTg                   <  2:1086589/150‑1 (MQ=255)
                                                                                                                                    gccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTa                                                                       <  1:1955864/97‑1 (MQ=255)
                                                                                                                                    gccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTa                                                                       >  2:1955864/1‑97 (MQ=255)
                                                                                                                                     ccATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTggg                 >  1:1372097/1‑150 (MQ=255)
                                                                                                                                          tgGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGACAAAGGTAGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAAcc            >  1:861882/1‑150 (MQ=255)
                                                                                                                                             ccTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTc         <  2:1686543/150‑1 (MQ=255)
                                                                                                                                              cTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCg        >  2:2148225/1‑150 (MQ=255)
                                                                                                                                              cTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCg        >  2:1180175/1‑150 (MQ=255)
                                                                                                                                                   c‑acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCa                            <  2:1737136/125‑1 (MQ=255)
                                                                                                                                                   c‑acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCa                            >  1:1737136/1‑125 (MQ=255)
                                                                                                                                                     acaAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCt  >  1:371383/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCACACACAGCCAACGTCGAGTTCGCGGCGGCGGCGCCGTATGCGGCGTTGTTGATTGTGGTGTCGGGGTTGCCGGTGTATTTGCTGACTACGCGGATGTATTTGAACAAGGCTTGAAAGCTTGCCCAGGCCGCCATGTGGCCTGGGC‑ACAAGCCTGAGTGCCTAGACTTCATCACAAGTTCACTTTAAAACTCTCACTAGCCAGTTGAAAGCAAAGAACAAGGTCGTAGATACTACAAGCCCCACCCAAGAGGGTAACAAAACTCTTTTCATAGACCTTGGGAAACCCTCGAGATCT  >  NC_002947/5552269‑5552566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.