New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1015854	0 (0.000)	14 (0.820)	13/234	NT	73.7%	intergenic (‑81/‑687)	SBRG_Ecoli_galE/prfC	SBRG_Ecoli_galE/peptide chain release factor 3
	?	NC_002947	= 5067412	10 (0.590)					coding (1092/1098 nt)	PP_4459	transposase

AGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1015725‑1015854 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagtgTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGGGTTGGGCGTTGTGCAGCGCTAA  <  NC_002947/5067412‑5067281                                                                                                                                                                                                                                                                        AGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGT                                                                                                                                >  2:416642/1‑136         CTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATA                                                                                                                        >  1:154539/1‑136                TGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTT                                                                                                                 >  2:386499/1‑136                       GCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTA                                                                                                          >  1:175913/1‑136                           CCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCT                                                                                                      <  2:235872/136‑1                             ACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCG                                                                                                    <  2:452724/136‑1                                  TAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGC                                                                                               <  1:386499/136‑1                                             CTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTC                                                                                    <  1:416642/136‑1                                                                        GTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGT                                                         >  1:240517/1‑136                                                                        GTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGC                                                                <  1:97340/129‑1                                                                        GTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGC                                                                >  2:97340/1‑129                                                                              AATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCAC                                                   >  2:121681/1‑136                                                                                                      CGAAAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAG                           >  2:441713/1‑136                                                                                                         AAAGTGTGACATGGAATAAATTAGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGG                        >  1:247852/1‑136                                                                                                                               AGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGGGTTGGGCGTTGTGCAGCGCTAA  <  1:441713/136‑1                                                                                                                               AGTGTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCATGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGGGTTGGGCGTTGTGCAGCGCTAA  <  2:4705/136‑1                                                                                                                                                                                                                                                                        AGGTATGACTTCCAATGTAACCGCTACCACCGGTAACCAGAACTCTCATAATTCGCTCCATTAGGCTTATGGTATGAAATAACCATAGCATAACAAAGATGCGAAAAGTGTGACATGGAATAAATTAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1015725‑1015854 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagtgTCCTGTCTCAGATAAAACGTTCTCTTTATTCTCGCGTGCCATTGCCTCTCGGGCACCCTGGATCTTGCGCAAGATGTCTTCACCTTTCGCGCTCCAGACGTACCGAGAGGGTTGGGCGTTGTGCAGCGCTAA  <  NC_002947/5067412‑5067281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.