| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1015854 | 0 (0.000) | 14 (0.820) | 13/234 | NT | 73.7% | intergenic (‑81/‑687) | SBRG_Ecoli_galE/prfC | SBRG_Ecoli_galE/peptide chain release factor 3 |
| ? | NC_002947 | = 5067412 | 10 (0.590) | coding (1092/1098 nt) | PP_4459 | transposase | |||||
TTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAA > NC_002947/5067281‑5067542 | ttAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCATGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcact < 2:4705‑M2/136‑5 (MQ=255)ttAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcact < 1:441713‑M2/136‑5 (MQ=255) ccTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttt > 1:247852‑M2/1‑110 (MQ=255) ctcGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcg > 2:441713‑M2/1‑107 (MQ=255) tACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTg < 2:27258/136‑1 (MQ=255) cgAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTggg > 2:458575/1‑136 (MQ=255) gTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatt > 2:121681‑M2/1‑83 (MQ=255) taaGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCt < 1:75170/135‑1 (MQ=255) gACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTAcc < 1:296476/136‑1 (MQ=255) aCATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcatac > 1:240517‑M2/1‑77 (MQ=255) aCATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTAccc < 2:444234/136‑1 (MQ=255) gcgcAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcatac < 1:97340‑M2/129‑60 (MQ=255) gcgcAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcatac > 2:97340‑M2/1‑70 (MQ=255) ccAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAAt > 1:461722/1‑136 (MQ=255) cAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATg > 1:50566/1‑136 (MQ=255) gagaGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgag < 1:416642‑M2/136‑87 (MQ=255) cAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTc < 1:464632/63‑1 (MQ=255) cAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTc > 2:464632/1‑63 (MQ=255) gCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggtta < 1:386499‑M2/136‑98 (MQ=255) cgAGAATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggt < 2:452724‑M2/136‑103 (MQ=255) agaATAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtgg < 2:235872‑M2/136‑105 (MQ=255) tAAAGAGAACGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagc > 1:175913‑M2/1‑28 (MQ=255) aaaGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCTGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAAc < 1:90277/136‑1 (MQ=255) aaCGTTTTATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttaca > 2:386499‑M2/1‑21 (MQ=255) tATCTGAGACAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaag > 1:154539‑M2/1‑14 (MQ=255) aCAGGAcactaatttattccatgtcacacttttcgcatctttgttatgctatggttatttcataccataagcctaatggagcgaattatgagagttctggttaccggtggtagcggttacattggaagtcatacct > 2:416642‑M2/1‑6 (MQ=255) | TTAGCGCTGCACAACGCCCAACCCTCTCGGTACGTCTGGAGCGCGAAAGGTGAAGACATCTTGCGCAAGATCCAGGGTGCCCGAGAGGCAATGGCACGCGAGAATAAAGAGAACGTTTTATCTGAGACAGGACACTAGGCTGTAGCTACTCAGACAGTCGTCGGTGAGGCGAGCCTGGGGAGGCCCTACCCAGACACTATGAGCAATGTCTCTTAGGAATAGATTGAATTACTTCCCCAACCCCTTTGCTAGCAGCGCGAAA > NC_002947/5067281‑5067542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |