| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1825976 | 0 (0.000) | 9 (0.030) | 5/264 | NT | 100% | coding (748/1422 nt) | PP_1624 | group II intron‑encoding maturase |
| ? | NC_002947 | = 2075325 | NA (NA) | coding (707/1422 nt) | PP_1846 | group II intron‑encoding maturase | |||||
CGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1825906‑1825976‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < NC_002947/2075325‑2075177 CGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGT‑TGCTGTCGAATATCCTGCTCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTATCTTTGAc > 2:6761340/1‑149 aaggcGGAGGGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGA < 2:1899671/145‑1 GGGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGA > 2:4873168/1‑150 GGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGAT > 1:4232015/1‑150 GGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGAT > 1:811486/1‑150 GGACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGAT > 1:3163552/1‑150 GACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATC > 2:3477570/1‑150 GACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTT < 2:1238954/101‑1 GACGCCGCAAGGCGGCCC‑CTCCTGCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTT > 1:1238954/1‑101 ctgcgtTGGGCTGACG‑ACA‑CC‑GCCCGTCTTGATCCCGGATTCAAGGTAGCGGCTAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTTACCCGATCGAAAAACTTCTCCAGATCGAG < 1:5835048/144‑1 GCCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTT > 2:6122578/1‑150 CCGTGGGCTGGCG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC < 1:289880/150‑1 CCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC < 2:2383916/150‑1 CCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC > 2:5194862/1‑150 CCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC < 2:2218622/150‑1 CCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC > 1:1396399/1‑150 CCGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC < 2:1301044/150‑1 CCGTGGGCTGAAG‑ACA‑CC‑TCCCGACATGATCACGGCTTAAAGGTAGCTGCTAATAAGCCTGTGTACGAACTTGTCTTTGATCCTACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTC < 1:2399367/150‑1 CCGTGGACTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGAACCGATCGAAAAACTTCTCCAGATCGAGTTC > 2:2416435/1‑150 CGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCC < 1:4479543/150‑1 CGTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCC < 1:2429084/150‑1 GTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:5254817/150‑1 GTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA > 1:6857090/1‑150 GTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA > 2:4734275/1‑150 GTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:5254824/150‑1 GTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA > 1:3396187/1‑150 GTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 1:1711217/150‑1 GTGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCA < 2:816356/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 2:1608034/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 2:4594262/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 2:3691148/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 2:3691096/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 2:2776768/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 2:2683847/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 1:4799718/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 1:1391789/150‑1 TGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < 1:1391740/150‑1 CGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTCTCGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1825906‑1825976‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtGGGCTGACG‑ACA‑CC‑GCCCGACATGATCCCGGCTTCAAGGTAGCGGCGAATAAGCCTGAGTACGCACTTGTCTTTGATCCGACGTTCGATGCAGGCCATGAGGATGTCGTGATTGACCCGATCGAAAAACTTCTCCAGATCGAGTTCCAC < NC_002947/2075325‑2075177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |