mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 147 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6082826 = | 194 (0.660) | 5 (0.020) | 4/226 | NT | 3.3% | intergenic (‑123/+115) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter |
| ? | NC_002947 | 6082926 = | 134 (0.550) | intergenic (‑223/+15) | PP_5329/PP_5330 | phosphate ABC transporter substrate‑binding protein/MFS transporter | |||||
| * | ? | NC_002947 | 6080732 = | 320 (1.090) | 5 (0.020) | 5/264 | NT | 1.6% | coding (835/2289 nt) | PP_5328 | phosphate ABC transporter permease |
| ? | NC_002947 | 6080777 = | 307 (1.090) | coding (790/2289 nt) | PP_5328 | phosphate ABC transporter permease | |||||
| * | ? | NC_002947 | = 6038719 | 325 (1.110) | 8 (0.030) | 5/260 | NT | 2.4% | coding (37/1212 nt) | dfp | bifunctional 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase |
| ? | NC_002947 | = 6038747 | 333 (1.200) | coding (65/1212 nt) | dfp | bifunctional 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase | |||||
| * | ? | NC_002947 | 5983361 = | 309 (1.050) | 5 (0.020) | 3/262 | NT | 1.7% | coding (761/993 nt) | PP_5241 | LuxR family transcriptional regulator |
| ? | NC_002947 | 5983405 = | 267 (0.950) | coding (717/993 nt) | PP_5241 | LuxR family transcriptional regulator | |||||
| * | ? | NC_002947 | 5932940 = | 206 (0.700) | 7 (0.030) | 4/228 | NT | 4.4% | intergenic (‑41/+112) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein |
| ? | NC_002947 | 5933014 = | 135 (0.550) | intergenic (‑115/+38) | PP_5195/fbpA | iron ABC transporter permease/iron ABC transporter substrate‑binding protein | |||||
| * | ? | NC_002947 | 5859375 = | 281 (0.960) | 6 (0.020) | 3/264 | NT | 2.2% | coding (390/1392 nt) | tcyP | sodium/cystine symporter |
| ? | NC_002947 | 5859404 = | 254 (0.900) | coding (419/1392 nt) | tcyP | sodium/cystine symporter | |||||
| * | ? | NC_002947 | 5834802 = | 303 (1.030) | 6 (0.020) | 5/264 | NT | 2.0% | coding (192/1026 nt) | ftsX | cell division protein FtsX |
| ? | NC_002947 | 5834841 = | 304 (1.080) | coding (153/1026 nt) | ftsX | cell division protein FtsX | |||||
| * | ? | NC_002947 | 5822810 = | 346 (1.180) | 3 (0.010) | 3/264 | NT | 0.90% | coding (149/1011 nt) | pilT | twitching motility protein |
| ? | NC_002947 | 5822894 = | 331 (1.170) | coding (65/1011 nt) | pilT | twitching motility protein | |||||
| * | ? | NC_002947 | = 5779068 | 287 (0.980) | 6 (0.020) | 4/262 | NT | 2.1% | coding (626/657 nt) | betI | choline‑responsive transcriptional repressor BetI |
| ? | NC_002947 | = 5779099 | 284 (1.010) | coding (657/657 nt) | betI | choline‑responsive transcriptional repressor BetI | |||||
| * | ? | NC_002947 | 5684809 = | 301 (1.030) | 8 (0.030) | 5/242 | NT | 3.3% | intergenic (+27/‑137) | bioA/rsmE | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase |
| ? | NC_002947 | 5684913 = | 203 (0.780) | intergenic (+131/‑33) | bioA/rsmE | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase | |||||