New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 86765 | 156 (0.650) | 8 (0.030) +GC |
3/270 | NT | 7.0% | intergenic (‑48/+97) | PP_0075/PP_0076 | choline sulfate transporter/choline betaine‑binding protein |
? | NC_002947 | = 1504460 | 59 (0.240) | intergenic (+81/‑85) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
GGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/86669‑86765 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCAC < NC_002947/1504460‑1504327 || GGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGC < 2:1746277/150‑1 CGGGGAAGCCAGGTGAGGAAGGGCAGCATTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGG < 1:1779065/150‑1 CGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGG < 1:3287787/150‑1 CGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGG < 1:798406/150‑1 CGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGG < 2:5289874/150‑1 GAGGACGGGCAGCAGTAAAGCGCGGCGAGGCAGGGGTTATCCACAATCCTTAAGGGGTCGCCACGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCC < 1:5211600/150‑1 GAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCATGCCCGCAAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACa < 2:79711/150‑2 CTGTGGGCGCGGGCGGGCCCGCTACCACCGGCAACGCCGGGGCCAGGCCCCGCGGCGCCTGTTTCGGGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCAC < 2:1071045/150‑1 || GGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/86669‑86765 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCAC < NC_002947/1504460‑1504327 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |