| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 943826 = | 50 (0.250) | 5 (0.030) | 3/264 | NT | 6.9% | coding (1799/18933 nt) | PP_0806 | surface adhesion protein |
| ? | NC_002947 | 943866 = | 88 (0.470) | coding (1759/18933 nt) | PP_0806 | surface adhesion protein | |||||
AGCATCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/943980‑943826‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTGGCAATGGCACTGCCA > NC_002947/943866‑944014 AGCATCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGAC > 1:1096595/1‑150AGCATCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGAC > 2:4220005/1‑150AGCATCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGAC > 1:3568662/1‑150 GCATCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACG < 1:4476478/150‑1 CATCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGG > 2:520020/1‑150 ATCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGC > 2:3767707/1‑150 TCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCA > 1:2447066/1‑150 CGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAG > 2:4329264/1‑150 CGCCCCTGCCGCACCGACCGAACTGGCGGTGA‑‑‑‑‑‑‑‑GGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCGTGTGCGGGATTCAGTTCGATG > 2:1890684/1‑150 CCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCAACGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGT > 1:2337765/1‑150 CCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTT > 1:2546215/1‑150 CTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCG > 1:1125640/1‑150 CTGGCGGTGAGCGCGGACGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCGACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATC < 2:2546215/150‑1 CGGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTGGCAATGGCAC > 2:2439064/1‑150 GGCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTGGCAATGGCACT < 1:2853201/150‑1 GCAGGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTGGCAATGGCACTG > 1:1284571/1‑150 GGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTGGCAATGGCACTGCCA > 1:3449312/1‑150 AGCATCGAACTGAATCCCGCACAAGCCAACGGCGAACTGCTGGACGTGGTTGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAACTGGCGGTGAGCGCGGACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/943980‑943826‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagGGGCGGTGATGTCGGGCGCGGTGATCTGTGCGGGCAGCGAGGAAACGCCGCCGTCATCGATGGCAACCACGTCCAGCAGTTCGCCGTTGGCTTGTGCGGGATTCAGTTCGATGCTGAAGCTGCCATCGGCGTTGGCAATGGCACTGCCA > NC_002947/943866‑944014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |